|
Name : avrF (PSPPH_1267) Accession : YP_273526.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III chaperone protein AvrF Function : - COG functional category : - COG ID : - EC number : - Position : 1477289 - 1477678 bp Length : 390 bp Strand : + Note : identified by match to protein family HMM PF06704 DNA sequence : ATGAGAAACCCGACACCCGATTTTGCCCGCTTCATCAACGCTCTGGGCGTCCAACTCGGTACATCACTGGCCTTGCAGAA TGGCGTATGCGCCCTTTACGACGGCCAGAACAACGAAGCGGCGGTCATCGAATTGCCCGAGCACAGCGAAATGGTCGTCT TTCATTGCCGAGTAGGTCGTTGTCCGGAGCGTTCCACTGATCTACAGCGCCTGTTGAGCCTGAACTTCGACGTCGCCCGT TTGCACGGTTGCTGGTTTGCTATCGATCAGGGCGATGTACGTCTATGCGCCCAGCGCGAACTGGCATCGCTCGATGAGCC GGCGTTCTGCGACGTGACTCGCGGCTTCATTTCCCAGGCTCGTGAGGCTCGCGCATTTCTACAGGCTTGA Protein sequence : MRNPTPDFARFINALGVQLGTSLALQNGVCALYDGQNNEAAVIELPEHSEMVVFHCRVGRCPERSTDLQRLLSLNFDVAR LHGCWFAIDQGDVRLCAQRELASLDEPAFCDVTRGFISQAREARAFLQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71500.1 | unknown | Not tested | Hrp PAI | Protein | 1e-52 | 90 |
| shcE | NP_791203.1 | type III chaperone ShcE | Virulence | Hrp PAI | Protein | 1e-52 | 90 |
| avrF | AAT96165.1 | AvrF | Not tested | T-PAI | Protein | 4e-47 | 76 |
| avrF | AAT96219.1 | AvrF | Not tested | T-PAI | Protein | 4e-47 | 76 |
| avrF | AAT96271.1 | AvrF | Not tested | S-PAI | Protein | 3e-34 | 59 |
| avrF | AAT96312.1 | AvrF | Not tested | S-PAI | Protein | 3e-34 | 59 |
| avrF | AAT96351.1 | AvrF | Not tested | S-PAI | Protein | 4e-34 | 58 |
| avrF | ABA47300.1 | AvrF | Not tested | S-PAI | Protein | 2e-32 | 56 |
| dspF | AAC04851.1 | DspF | Virulence | Hrp PAI | Protein | 3e-22 | 42 |
