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Name : PSPPH_1269 (PSPPH_1269) Accession : YP_273528.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : lytic murein transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG4623 EC number : 3.2.1.- Position : 1483093 - 1484556 bp Length : 1464 bp Strand : + Note : identified by match to protein family HMM PF01464 DNA sequence : ATGCCCGCCGTTGCCTCCATCGTATCGAGCCCCCGCTTGCTGGCTCGCGCTATTCAAATTGCTTTGCTCGCACTGGGCTC GCTGTGTGTGGGTTGTCAGTCTGTGGACTATTCAGCACCCCGGCAGGAACGCAACCCGCGTCTGGTTACGGGCCTGGTCT ACTGGGGGGGAGATGATCAGGACGGTGCGCGGGCGGCAGAGAAAATTTCCGATTTGCCCGTCTATAACGGCGAGGACGTG TGGCAGCGCGTTGCGCAACGCAGCAGGCTGGCCGATGGCCAGGGTATGAATGAGCGTATCGCTCGCCAGCGCGATTGGCT GCTGAGCAATCGTGGGTTTATCAGTGGGGCAAGTGTCCGGGCCAGCCCCTATCTGCATTTTATTGTCGAGCGCCTGGACG AGCGCAACATGCCGTTGGAGCTGGCGCTGTTGCCAATGATCGAAAGCTCCTACAACCCGATGGCCAATTCACCGGCTGCG GCGGCTGGCCTGTGGCAATTCATGCCTTCTACCGGGCGCAGCTTCAATCTTTATCAAAGCGCTACGTACGACGCTCGCCG TGACGTGGTGGCCTCAAGCAAGGCAGCGATGGATTACCTGACCCGCCTGCATGATCAGTTCAATAATGACTGGCTGCTGG CACTGGCGGCCTACAACTCGGGCGAAGGCACAGTCGGCCGGGCGATTGAGGCCAATCGGCGGCGCGGACTACCTGTTGAT TACTGGCACCTGAATTTGCCCAGGGAAACCCTGGATTACGTGCCCAGGCTGCTGGCGCTCTCGCTGATCGTGCGCAACGC CGCTACCTATGGTGTAAAACTCACCCCGGTCGCCAATACGCCATATTTTGACGTGGTCGAACTCAACCATGCGGTAGACC TGACCCAGCTTGCGGCCACTGCGGGTGTGGATGAGGGCCAGTTGCTGAGACTCAACTCGGCGTTTCTGAGCAAAAAAACG CCAGATGGACCAGGGCGGTTGCTGTTGCCCAAGACTCAGAAGCAAGTGCTGACAGCCGGTATCGCGCGAATAACCGGGGA ATCTCCTGTGACTACGGGCACCCCTCAGCGCATTGATAAGCCTGTGGTCGAACACTTGGCATTACCCCAGACGGCACAGC CGGTGAGGGTGGTCGAGCGAACGCCGGTGCCCAGGCCAGCGCAGCCGGTTGAGGTAGCTGAACGGGCACCTGTGCCCAAC CCAGTGGAACCCATGCGGGTAGCAGAGCAGTCTTCTGCGCCGCAAACACCACCCTTGGTACCGGCTGTCGAGCATAAAGA GCCGCCGATGACCCCGCGGACACCGGCAAGGGAGGCATTATCGGTGCCTAGCGTGTTACAAGCCGGGCGCTACGTGGATG ACCGCTCGTCGCCTCGCAGGCGTGATGATATCGAGGATCGTACGGGCCCGCGCGAGCTGCCAAGCGGCCCGCGTATCGTG GTCTATGCCAGCGGTTCACGCTAA Protein sequence : MPAVASIVSSPRLLARAIQIALLALGSLCVGCQSVDYSAPRQERNPRLVTGLVYWGGDDQDGARAAEKISDLPVYNGEDV WQRVAQRSRLADGQGMNERIARQRDWLLSNRGFISGASVRASPYLHFIVERLDERNMPLELALLPMIESSYNPMANSPAA AAGLWQFMPSTGRSFNLYQSATYDARRDVVASSKAAMDYLTRLHDQFNNDWLLALAAYNSGEGTVGRAIEANRRRGLPVD YWHLNLPRETLDYVPRLLALSLIVRNAATYGVKLTPVANTPYFDVVELNHAVDLTQLAATAGVDEGQLLRLNSAFLSKKT PDGPGRLLLPKTQKQVLTAGIARITGESPVTTGTPQRIDKPVVEHLALPQTAQPVRVVERTPVPRPAQPVEVAERAPVPN PVEPMRVAEQSSAPQTPPLVPAVEHKEPPMTPRTPAREALSVPSVLQAGRYVDDRSSPRRRDDIEDRTGPRELPSGPRIV VYASGSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71498.1 | unknown | Not tested | Hrp PAI | Protein | 4e-155 | 73 |
| hrpH | NP_791205.1 | membrane-bound lytic murein transglycosylase D | Virulence | Hrp PAI | Protein | 5e-155 | 73 |
| celORF1 | AAP31244.1 | conserved effector locus ORF1 | Not tested | Hrp PAI | Protein | 1e-142 | 69 |
| unnamed | AAT96217.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 3e-133 | 63 |
| unnamed | AAT96163.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 2e-133 | 63 |
