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Name : hrcC (PSPPH_1280) Accession : YP_273539.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III outer membrane protein HrcC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1492115 - 1494214 bp Length : 2100 bp Strand : + Note : identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02516 DNA sequence : ATGCGCAAGGCCTTGATGTGGTTGCCTTTATTGTTGATCGGGTTGACCCCTGTTACATGGGCGGTCACCCCCGAAGCCTG GAAACACACGGCTTACGCCTACGACGCCCGGCAGACTGAACTGACCACGGCGCTGGCTGACTTTGCCAAAGAGTTCGGCA TGGCGCTGGACATGCCGTCCATTCCAGGAACGCTCGATGGCCGGATTCGTGCCCAGAGCCCGGAAGAGTTTCTCGACCGG CTTGGCCAGGAATACCACTTCCAGTGGTTTGTCTATAACGACACGCTCTACGTCAGCCCGTCCAGCGAACACACCTCGGC GCGCGTAGAAGTCTCATCCGATGCGGTAGATGACTTGCAGACGGCGTTGACCGATGTAGGCCTGCTGGATAAACGCTTTG GCTGGGGCGTCCTGCCTAACGAGGGTGTGGTGCTGGTTCGCGGCCCGGCAAAATACGTGGAACTGGTTCGTGACTACAGC AAAAAAGTCGAGACGCCGGAAAAGGGCGACAAGCAAGACATTGTTGTGTTTCCGCTCAAATACGCCAACGCGTCGGACCG GACCATTCGTTATCGTGATCAACAACTGACAGTAGCGGGTGTCGCCAGCATTCTTCAGGATTTGCTCGACACGCGTTCTC GCGGCGAAGCCATCAATGGCATCAACCTGTTGGGGCACGGTGGCGCAAATGCCGGACTCGCGGGTGGCGACGCGGACACT CAAAGCCTGCCTCTGGATTCCAGCGGCATCGATACCGGCGCCTTGCAACAGGGCCTTGATCGGGTGTTGAGCTATGGCAG CGGCAGCAAGAAATCCGGGAAAAGCCGTTCCGGTGGCCGCGCGAACATTCGTGTAACAGCCGATGTGCGCAACAACGCGG TACTGATTTATGACTTGCCGTCGCGCAAGCCGATGTACGAGAAACTCATCAAGGAACTGGACGTCTCACGCAACCTGATC GAAATCGATGCGGTGATCCTCGACATTGATCGCAACGAGCTGGCGGAGCTCTCCAGTCGCTGGAATTTCAACGCAGGCAG CGTCGGCGGAGGCGTCAACCTGTTCGACGCGGGCACCAGTTCGACGATGTTCATTCAGAACGCGGGCAAGTTTTCTTCAG AGTTGCATGCGCTGGAAGGCAACGGTTCAGCGTCCGTGATCGGCAACCCATCCATTCTTACCCTGGAAAATCAGCCGGCT GTCATTGACTTCAGCCGGACTGAATACATCACGGCGACGTCAGAACGCGTCGCCAATATCGAGCCCATCACCGCCGGGAC CAGTCTGCAGGTGATCCCGCGTTCACTGGACCACGATGGCAAGCCTCAGGTGCAACTGATTGTCGACATTGAAGACGGCC AGATCGATATCTCCGATATCAACGATACGCAACCCAGTGTGCGCAAAGGCAACGTCAGCACCCAGGCCGTCATCGCCGAA CATGGTTCGCTGGTGATCGGCGGTTTCCACGGGCTGGAAGCCAATGACAAGGTCCACAAGATTCCCTTGCTGGGCGACAT TCCCTACATCGGCAAGCTGTTGTTCCAGTCCCGCAGCCGTGAACTGAGCCAGCGCGAACGTCTGTTCATTCTGACCCCGC GCCTGATCGGTGATCAGGTCAACCCGGCTCGCTATGTGCAAAACGGCAACCCGCATGACGTCGATGATCAGATGAAAAGG ATCAAGGAGCGACGCGACGGTGGAGAGTTGCCGACCCGTGGCGATGTTCAGAAGGTCTTCACCCAGATGGTCGATGGAAC TGCCCCCGTGGGTATGCGTACCGGCGAAACACTGCCATTTGAAACCGATAGCCTTTGTGATCCGGGCGCGGGACTGACGC TCGACGGTCAACGTTCGCAGTGGTACGCCAGAAAGGATTGGGGTGTTGCGGTTGTCGTGGCGCACAACAATACCGACAAA CCGGTACGTATTGACGAGAGCCGATGCGGCGGTCGCTGGGTCATCGGCGTTGCCGCCTGGCCTCACGCCTGGCTGCAACC GGGCGAAGAGAGCGAGGTGTATATCGCTGTGCGCCAGCCACAGATATCGAAAATGGCGAAAGAGAGTCGGCCATCACTGC TCAAGGGAGCGAAACCATGA Protein sequence : MRKALMWLPLLLIGLTPVTWAVTPEAWKHTAYAYDARQTELTTALADFAKEFGMALDMPSIPGTLDGRIRAQSPEEFLDR LGQEYHFQWFVYNDTLYVSPSSEHTSARVEVSSDAVDDLQTALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYS KKVETPEKGDKQDIVVFPLKYANASDRTIRYRDQQLTVAGVASILQDLLDTRSRGEAINGINLLGHGGANAGLAGGDADT QSLPLDSSGIDTGALQQGLDRVLSYGSGSKKSGKSRSGGRANIRVTADVRNNAVLIYDLPSRKPMYEKLIKELDVSRNLI EIDAVILDIDRNELAELSSRWNFNAGSVGGGVNLFDAGTSSTMFIQNAGKFSSELHALEGNGSASVIGNPSILTLENQPA VIDFSRTEYITATSERVANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIAE HGSLVIGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMKR IKERRDGGELPTRGDVQKVFTQMVDGTAPVGMRTGETLPFETDSLCDPGAGLTLDGQRSQWYARKDWGVAVVVAHNNTDK PVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLKGAKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 91 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrcC | AAT96206.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 84 |
| hrcC | AAT96152.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 84 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 80 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 8e-137 | 46 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 3e-135 | 46 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 1e-135 | 46 |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 5e-131 | 44 |
