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Name : hrcT (PSPPH_1283) Accession : YP_273542.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1496038 - 1496832 bp Length : 795 bp Strand : - Note : identified by match to protein family HMM PF01311; match to protein family HMM TIGR01401 DNA sequence : ATGCCCTTCGACGCCCACGAAGCGTTCCAATTCATGCTGGGCATGGGTCTGGCGATGGCGCGCCTGCTGCCGTGCATGCT TCTGGTGCCAGCCTTCTGTTTCAAATACCTGAAAGGCCCGCTGCGCTATGCGGTAGTGGCCGTGCTGGCGATGGTCCCGG CCCCCGCAATCAGCCGCGCGCTGGGTTCTCTTGACGATAACTGGTTTGCCATCGGCGGCCTGATGATCAAAGAGGCGGTA CTGGGCACGCTATTGGGGCTGTTGCTGTATGCGCCGTTCTGGATGTTTGCCTCGGTCGGCGCCCTGCTCGACAGTCAGCG CGGGGCGCTCAGCGGTGGCCAGTTGAACCCGGCCCTCGGTCCGGACGCCACACCGCTGGGCGAGTTGTTTCAGGAAACCC TGATCATGCTGGTGATTCTCACTGGCGGTCTTTCACTCATCACTCAGGTCATCTGGGACAGCTACAGCGTCTGGCCACCG ACTGCCTGGCTGCCGGGCATGACCGCAGGCGGTCTGGACGTCTTTCTGGAACAGCTCAACCAGACCATGCAACACATGCT GTTGTATGCCGCGCCCTTCATTGCCCTGCTACTGTTGATCGAAGCCGCGTTTGCAATCATCGGCCTGTATGCACAGCAAC TGAACGTATCGATTCTGGCCATGCCAGCCAAAAGCATGGCCGGCCTGGCCTTTCTGTTGATCTACCTGCCAACGCTGCTG GAGCTGGGCACCGGTCAACTGTTGACGCTGGTTGATCTGAAGTCGCTGCTGGCGCTTCTGGTGCAAGTGCCGTGA Protein sequence : MPFDAHEAFQFMLGMGLAMARLLPCMLLVPAFCFKYLKGPLRYAVVAVLAMVPAPAISRALGSLDDNWFAIGGLMIKEAV LGTLLGLLLYAPFWMFASVGALLDSQRGALSGGQLNPALGPDATPLGELFQETLIMLVILTGGLSLITQVIWDSYSVWPP TAWLPGMTAGGLDVFLEQLNQTMQHMLLYAAPFIALLLLIEAAFAIIGLYAQQLNVSILAMPAKSMAGLAFLLIYLPTLL ELGTGQLLTLVDLKSLLALLVQVP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 6e-74 | 96 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 6e-74 | 96 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 1e-70 | 89 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 1e-70 | 89 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 2e-67 | 86 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 2e-67 | 86 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 4e-36 | 53 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 4e-36 | 53 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 4e-36 | 53 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 1e-35 | 51 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 1e-26 | 50 |
