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Name : hrcQb (PSPPH_1286) Accession : YP_273545.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrcQb Function : - COG functional category : N : Cell motility COG ID : COG1886 EC number : - Position : 1497757 - 1498143 bp Length : 387 bp Strand : - Note : identified by match to protein family HMM PF01052 DNA sequence : ATGAGTACTGAAGATCTGTATCAGGAAGATGTCGAGATGCTCGACGACTATGAAGACCCGTCGACTGAACAGCACTGGTC CGAAGAAGACGGCGAGCCATCCGGGTATGCGACGGCCGAACCGGACGATCACGCAGCGCAGGAAGAACAGGACGAGCCCC CGGCACTCGATTCGCTGGCACTGGACCTGACCCTGCGTTGCGGCGAGCTCAGGCTGACGCTCGCCGAACTGCGCCGGCTG GATGCCGGGACTATCCTTGAAGTCACCGGCATTTCGCCGGGGCACGCGACGTTGTGCCATGGCGAACAGGTGGTGGCCGA GGGTGAGCTGGTGGATGTCGAGGGTCGCCTGGGTCTGCAGATTACCCGCCTGGTGACCCGATCATGA Protein sequence : MSTEDLYQEDVEMLDDYEDPSTEQHWSEEDGEPSGYATAEPDDHAAQEEQDEPPALDSLALDLTLRCGELRLTLAELRRL DAGTILEVTGISPGHATLCHGEQVVAEGELVDVEGRLGLQITRLVTRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcQb | ABQ88358.1 | HrcQb | Virulence | Hrp PAI | Protein | 5e-33 | 70 |
| hrpU | AAB05074.1 | HrpU | Virulence | Hrp PAI | Protein | 5e-33 | 70 |
| hrcQb | NP_791223.1 | type III secretion protein HrcQb | Virulence | Hrp PAI | Protein | 2e-23 | 68 |
| hrcQb | AAG33883.1 | HrcQb | Virulence | Hrp PAI | Protein | 2e-23 | 68 |
| hrcQb | AAT96199.1 | HrcQb | Virulence | T-PAI | Protein | 2e-26 | 64 |
| hrcQb | AAT96145.1 | HrcQb | Virulence | T-PAI | Protein | 2e-26 | 64 |
