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Name : hopX1 (PSPPH_1296) Accession : YP_273555.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : type III effector HopX1 Function : - COG functional category : - COG ID : - EC number : - Position : 1508695 - 1509837 bp Length : 1143 bp Strand : + Note : - DNA sequence : ATGAGAATTCACAGTGCTGGTCACAGCCTGCCCGCGCCAGGCCCTAGCGTGGAAACCACTGAAAAGGCTGTTCAATCATC ATCGGCCCAGAACCCCGCTTCTTGCAGTTCACAAACAGAACGTCCTGAAGCCGGTTCGACTCAAGTGCGACCGAACTACC CTTACTCATCAGTCAAGACACGCTTGCCACCCGTTTCTTCCACAGGGCAGGCCATTTCTGACACGCCATCTTCATTGCCC GGTTACCTGCTGTTACGTCGGCTCGACCGACGTCCACTGGATGAAGACAGTATCAAGGCTCTGGTTCCGGCAGACGAAGC GTTGCGTGAAGCACGCCGCGCGTTGCCCTTCGGCAGGGGCAACATTGATGTGGATGCACAACGTACCCACCTGCAAAGCG GCGCTCGCGCAGTCGCTGCAAAGCGCTTGAGAAAAGATGCCGAGCGCGCTGGCCATGAGCCGATGCCCGAGAATGATGAG ATGAACTGGCATGTTCTTGTCGCCATGTCAGGGCAGGTGTTTGGCGCTGGCAACTGTGGCGAACATGCTCGTATAGCAAG CTTCGCTTACGGGGCCCTGGCTCAGGAAAGCGGGCGTAGTCCCCGCGAAAAGATTCATTTGGCCGAGCAGCCCGGAAAAG ATCACGTCTGGGCTGAAACGGATAATTCCAGCGCTGGCTCTTCGCCCATCGTCATGGACCCGTGGTCTAACGGCGCAGCC ATTTTGGCGGAGGACAGCCGGTTTGCCAAAGATCGCAGTGCGGTAGAGCGAACATATTCATTCACCCTTGCAATGGCAGC TGAAGCCGGCAAGGTTGCGCGTGAAACCGCCGAGAACGTTCTGACCCACACGACAAGCCGTCTGCAGAAGCGTCTTGCTG ATCAGTTGCCGAACGTCTCACCGCTTGAAGGAGGCCGCTATCAGCCGAAAAAGTCGGTGCTTGATGAGGCGTTCGCCCGA CGAGTGAGCGACAAGTTGAATAGTGACGATCCACGGCGTGCGTTGCAGATGGAAATTGAAGCTGTTGGTGTTGCAATGTC GCTGGGTGCCGAAGGCGTCAAGACGGTCGCCCGACAGGCGCCAAAGGTGGTCAGGCAAGCCAGAAGCGTCGCGTCGTCTA AAGGCATGCCTCCACGAAGATAA Protein sequence : MRIHSAGHSLPAPGPSVETTEKAVQSSSAQNPASCSSQTERPEAGSTQVRPNYPYSSVKTRLPPVSSTGQAISDTPSSLP GYLLLRRLDRRPLDEDSIKALVPADEALREARRALPFGRGNIDVDAQRTHLQSGARAVAAKRLRKDAERAGHEPMPENDE MNWHVLVAMSGQVFGAGNCGEHARIASFAYGALAQESGRSPREKIHLAEQPGKDHVWAETDNSSAGSSPIVMDPWSNGAA ILAEDSRFAKDRSAVERTYSFTLAMAAEAGKVARETAENVLTHTTSRLQKRLADQLPNVSPLEGGRYQPKKSVLDEAFAR RVSDKLNSDDPRRALQMEIEAVGVAMSLGAEGVKTVARQAPKVVRQARSVASSKGMPPRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85175.1 | AvrPphE8 | Not tested | Hrp PAI | Protein | 4e-146 | 99 |
| unnamed | AAF71495.1 | unknown | Not tested | Hrp PAI | Protein | 2e-121 | 77 |
| unnamed | AAN85190.1 | unknown | Not tested | Hrp PAI | Protein | 1e-121 | 77 |
