Gene Information

Name : capB (PSPPH_1380)
Accession : YP_273637.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : cold shock protein CapB
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1602035 - 1602244 bp
Length : 210 bp
Strand : -
Note : identified by similarity to SP:P80415; match to protein family HMM PF00313

DNA sequence :
ATGTCCAATCGCCAAACTGGTACCGTTAAGTGGTTCAACGATGAAAAAGGTTTCGGCTTCATCACTCCACAATCCGGTGA
CGACCTGTTCGTGCACTTCAAAGCTATACAATCCGACGGCTTCAAAAGCCTGAAAGAAGGCCAACAGGTTTCTTTCATCG
CTACCCGCGGTCAGAAAGGCATGCAAGCTGAAGAAGTTCAAGTTATCTAA

Protein sequence :
MSNRQTGTVKWFNDEKGFGFITPQSGDDLFVHFKAIQSDGFKSLKEGQQVSFIATRGQKGMQAEEVQVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-15 59