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Name : glcF (PSPPH_3254) Accession : YP_275414.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 3772226 - 3773458 bp Length : 1233 bp Strand : + Note : identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 DNA sequence : ATGCAGACCACATTGAGTGAACACGCCAGAACCCTGCCCCGCGCCGAAGAGGCCGAACACATCCTGCGCAGTTGCGTGCA TTGCGGTTTCTGCAATGCCACCTGCCCGACCTATCAACTGTTGGGTGATGAGCTGGACGGCCCGCGCGGCAGGATCTACC TGATCAAACAGGTGCTCGAAGGCCAGCAAGTCACCGAAAAAACCCGCTTGCACCTGGACCGCTGCCTGAGCTGCCGCAAC TGCGAAACCACCTGCCCGTCCGGCGTGGATTATCACAACCTGCTGGACATCGGCCGTGCAGCGGTTGAGGCCCTGGTGCC CCGCCCGCTTGGCCAGCGGTTGCTGCGTGAAGGCCTGCGCCAGGTAATTCCCAATGCCGGATTGTTCCGTTTGCTGACCG GAATGGGCATGAAGTTCAGGCCCTTGTTGCCGCAGACACTGGCAACCAAACTGCCTGCAACAGTCCATGCTGCCGGGCTG CGGCCGACCACTCGTCATGCGCGTCAGGCGCTGCTGCTTGATGGCTGCGTGCAGCCAGGTCTGTCACCTAATACCAACGC TGCCACGGCACGCGTGCTTGATCGTCTGGGCATCGGTATTACTGCGGTCAGCAAGGCCGGATGCTGCGGCGCCGTGGATT ACCATCTGAATGCACAGGAGGCAGGTCTGAAACGGGCGCGGCGCAACATCGACGTCTGGTGGACCGCGCTCGAAGGCGGT GCCGAAACCCTCATCCAGACGGCCAGCGGTTGCGGTGCATTCGTCAAGGACTACGGCCATTTGCTGCGCCACGACCCAGC CTATGCAGACAAGGCCGAGCGCATCAGTGCGTGCACAAAGGATCTGGTCGAAGTACTGCGTGACGAGCCGCTGGAAACCC TGGGCATCAAGGTCGACACGCGACTGGCGTTCCACTGCCCATGCACCTTGCAGCACGCACAGAAACTCGGTGGTGAAGTG GAACGCGTACTGACTCGTCTAGGCTTCAACCTGACCCAGGTGCCGGACGGCCATTTATGCTGCGGCTCTGCCGGGACCTA TTCAATCACTCAGCCGGCCTTGGCCCGTCAATTGCGCGACAACCGCATGAACGCGCTGGAAAGCGGCAAACCTCAGGTCA TCGCCACCGCCAATATCGGTTGTCAGACTCACCTGGCCAGCGCCAACCGAACTTCGGTACGGCACTGGATCGAGCTGATT GATGAAGCGCTTGGCACTCCAGAATCTCGCTGA Protein sequence : MQTTLSEHARTLPRAEEAEHILRSCVHCGFCNATCPTYQLLGDELDGPRGRIYLIKQVLEGQQVTEKTRLHLDRCLSCRN CETTCPSGVDYHNLLDIGRAAVEALVPRPLGQRLLREGLRQVIPNAGLFRLLTGMGMKFRPLLPQTLATKLPATVHAAGL RPTTRHARQALLLDGCVQPGLSPNTNAATARVLDRLGIGITAVSKAGCCGAVDYHLNAQEAGLKRARRNIDVWWTALEGG AETLIQTASGCGAFVKDYGHLLRHDPAYADKAERISACTKDLVEVLRDEPLETLGIKVDTRLAFHCPCTLQHAQKLGGEV ERVLTRLGFNLTQVPDGHLCCGSAGTYSITQPALARQLRDNRMNALESGKPQVIATANIGCQTHLASANRTSVRHWIELI DEALGTPESR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-138 | 71 |
