Gene Information

Name : ccmC (PSPPH_3312)
Accession : YP_275471.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 3834468 - 3835256 bp
Length : 789 bp
Strand : -
Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR01191

DNA sequence :
ATGAAAAGCAGCATCGGTTGGGCCTGGCTGCACACACTCGGCTCACCGAAAGGGTTTTACCGCGTCAGCGCACGTCTGCT
GCCGTGGCTGAGTGTGTCCGCTGCACTGCTGCTCGGCATCGGCATCATCTGGGGGCTGGCGTTTGCGCCGCCGGATTACC
AGCAGGGCAACAGCTTCCGGATCATTTATATCCATGTGCCTGCCGCCATGCTCGCCCAGTCCTGCTACGTCATGCTGGCC
CTGTGCGGCGTGGTCGGGCTGGTCTGGAAAATCAAACTGGCCGATGTCGCGCTGCAATGCGCTGCACCCATTGGCGCGTG
GATGACCGCGCTGGCACTGGCGACGGGCGCGATCTGGGGCAAGCCGACCTGGGGCGCGTGGTGGGTCTGGGACGCGCGCC
TGACCTCAATGCTGATTCTGCTGTTTCTGTACTTCGGCCTGATCGCGTTGGGCAATGCCATCAGCAACCGCGCCAGCGCT
GCCAAGGCCTGTGCACTGCTGGCCATCGTCGGCGTGGTGAATATCCCGATCATCAAATATTCGGTCGAGTGGTGGAATAC
CCTGCACCAGGGCGCGACGTTCAGCCTCACGGAAAAACCGGCCATGCCTGCCGAAATGTGGCTGCCGTTGCTGTTCACAG
CGTTGGGTTTTTACTGCTTCTTCGGCGTTGTATTGCTTTTGCGTATGCGCCTTGAAGTGCTGCGTCGCGAGTCGCGCACC
CAGTGGGCCAAGGCCGAGGTTCTGCGGAGCCTGGGGCAAACGCCAGAACCGTCGGAGGGCAGGTCTTGA

Protein sequence :
MKSSIGWAWLHTLGSPKGFYRVSARLLPWLSVSAALLLGIGIIWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSCYVMLA
LCGVVGLVWKIKLADVALQCAAPIGAWMTALALATGAIWGKPTWGAWWVWDARLTSMLILLFLYFGLIALGNAISNRASA
AKACALLAIVGVVNIPIIKYSVEWWNTLHQGATFSLTEKPAMPAEMWLPLLFTALGFYCFFGVVLLLRMRLEVLRRESRT
QWAKAEVLRSLGQTPEPSEGRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 4e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_275471.1 heme exporter protein CcmC VFG1856 Protein 3e-35 54