Gene Information

Name : PSPPH_3779 (PSPPH_3779)
Accession : YP_275919.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : cold shock domain-contain protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4329114 - 4329335 bp
Length : 222 bp
Strand : +
Note : identified by match to protein family HMM PF00313

DNA sequence :
ATGGGAAATCGTGATACTGGCACCGTAAAGTGGTTCAACACCTCCAAGGGCTTCGGCTTTATCTCCCGGGATTCCGGCGA
CGATATTTTTGTGCATTTTCGTGCCATTCGCGGTGAAGGCCATCGCGTACTGGTCGAAGGCCAACGCGTCGAGTTTTCCG
TGATGAACCGCGACAAAGGCCTGCAGGCCGAAGACGTTATTGCAGCCCTGCCCCGCCGCTGA

Protein sequence :
MGNRDTGTVKWFNTSKGFGFISRDSGDDIFVHFRAIRGEGHRVLVEGQRVEFSVMNRDKGLQAEDVIAALPRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-12 53