Gene Information

Name : avrB4-2 (PSPPH_0784)
Accession : YP_273068.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : type III effector AvrB4-2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 927577 - 928548 bp
Length : 972 bp
Strand : -
Note : -

DNA sequence :
ATGGGATGCATTACTTCAAAACCACTGGTTAGCTCTCCCCGGTGGCATAATTCAGCTACTAATTCCGAAAATTTAGAAAC
TGGTCAAAGAAGCCATAAAGCCTCTCTTTATGGTGCTATTTCTGGATCACCGGAAAGGAGTGAATTGACTTGGCATCAGC
AGTCGTTGGTTGGCGTAGCCCGATGGCCTGACAAAGAATATAATAGAGATCATGTCCCCCTGCAAATGGAATACGGTAGG
TCTTTTTGGAATGAGTCGCGAAAAATAGGAAGTGCATTAGCTAATGGTGAAATTCAGAATTTTGAAGACTTATGGGAGAA
AGCACGCGATTGGCGATGTTCAATGGCTAATCATGATGAGAATATATTTAAGAAACCTCGCAATAGTTATAATGAGTTTC
CTTTTACAACCCCATTAATAAATCAATACAATTATATTAAAGAAAGATATAGTGCCCGTACTGATGGGAGCTTGCAAAAA
CTCGATGATGAAGGCTTATTGCCACCAGCAAAAGAATTTTTGATAACGGATAAGATTTTTGGAGAGCCAATAAGCCTGAC
AAAGATAGTTTGCAGTTCAGATAGTTCTGCGCACCGAGACCAAAGACGATATTCGGATTTATGGTCGCGAGGCTTAGACT
ATGGAGAGCCACACTACATCCAACATACTTCATCGGAAGAAGTCCCTAAAATTCTTCATCATGTAAACGATTTGTTTGAT
GAGGTCCTACAATCAAACTTATCTACCAAGAAAGCACTTAAGTTTTTAGGCGAAATTCACTGGTGGTTGGCACATGCTAT
GCCTGATGAAAGGGGGAGCGCAGCCAAGAGTGAGCTTTGTGTACGTGCTATAGCCCAAGCCAAGGGCTTAGATTTACCTC
CTATGAAAAGTGGAATAGTTCCAGACTTGGAAGCAATGACTATGTCGCGTGAGCAATTTATCAAGCAGTATCCGTCAATG
TTTGATGATTAA

Protein sequence :
MGCITSKPLVSSPRWHNSATNSENLETGQRSHKASLYGAISGSPERSELTWHQQSLVGVARWPDKEYNRDHVPLQMEYGR
SFWNESRKIGSALANGEIQNFEDLWEKARDWRCSMANHDENIFKKPRNSYNEFPFTTPLINQYNYIKERYSARTDGSLQK
LDDEGLLPPAKEFLITDKIFGEPISLTKIVCSSDSSAHRDQRRYSDLWSRGLDYGEPHYIQHTSSEEVPKILHHVNDLFD
EVLQSNLSTKKALKFLGEIHWWLAHAMPDERGSAAKSELCVRAIAQAKGLDLPPMKSGIVPDLEAMTMSREQFIKQYPSM
FDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85189.1 unknown Not tested Hrp PAI Protein 3e-72 49
unnamed AAF71496.1 unknown Not tested Hrp PAI Protein 3e-68 47