|
Name : clpB (LIC12017) Accession : YP_001955.1 Strain : Genome accession: NC_005823 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2428166 - 2430748 bp Length : 2583 bp Strand : - Note : heat shock protein DNA sequence : ATGAAATTAGATAAACTTACATCCAAATTAAACGAAGCGATTTATAACGCACAAGCGTCTGCCGAAAAATTGGGAAATCC GGAAATTAGTGAAGAACATATTTTAAAGGAAGTTCTATCACAGCCGGACGGACTTGTACCTCTTTTAATTTCTAAACTCA ATCTGAGTCCAAAATCATTTTTGGAAAGTACAGAAAATGCTTTGGGAAAACAACCGAAAGTAGGAGGAAATACGTCTGCA GATGTAGGCTTTTCGCGTTCGGCGGTTTCACTTTTAAAAGCCGCCGATGAAGTAAGAAAAGAATTAAAAGACGAGTATCT TTCTACGGACCATATCTTACTCGGGCTCATGAAAAACGGTACTGGGTCGTTAAAAACTGAGTTTTTAAAATTAGGATTAG AATATCATAAATTACTTAAAATCACTTTGGAAAATAGAAAGGGAAAAACAATCATGGACGACTCGCCAGAAGGAAAAACG GATGCACTTGCAAAGTATGCAAAAAACCTAAATGAACTTGCCAAACAAGGAAAATTAGATCCTGTCATAGGAAGAGACGA GGAAATTAGAAGGACAATACAAGTTTTATCTAGAAGAACAAAAAACAATCCTGTGCTTATTGGAGAACCAGGAGTTGGAA AAACTGCAATCGTGGAAGGGCTAGCTAACAAAATCGTTCAAGGAGAAGTGCCTGAAGGAATCAAAAATAAAACACTTTAT ACCTTGGACTTAGGTTCCATGATCGCCGGGGCTAAATATAGAGGGGAATTTGAAGACAGACTCAAAGCGTTGTTAGACGA GGTCAAATCTTCAGACGGAGAAGTGATTTTATTCATAGACGAAATTCATACTCTTGTAGGCGCTGGAGCCACAGAAGGAG CATTAGATGCTTCTAATATGTTAAAACCCATGCTTGCTAGAGGAGAACTACGTTGTATAGGTGCAACTACTCTAAAAGAA TATCAGAAATATATAGAGAAAGACGCGGCTTTAGAAAGAAGGTTTCAACCTGTTTATGTCAAGGAACCTTCCGTAGAGGA AACCGTAACGATTTTAAGAGGGCTTAAGGGGCGTTACGAATTACATCATGGAATTAGAATATTAGATTCTGCTTTGATTG CTGCCGCTACACTTTCTAATCGTTATATATCCGATCGATTTCTTCCAGATAAGGCGGTGGACTTGATCGATGAGGCCTCT TCTAAAATGAGGATTGAGATAGATTCTATGCCCGAGGAACTCGATCGTGCAAACAAAAGGATTCAATCTCTAAAGATAGA AAGAGAAGCTCTAAAAAAAGAACAGGATACGGCTTCGAAAGAAAGATTAAAAACTCTCGAAAGGGATTTATCCGAACAAG AGCAAAATTTTCAAACTTTAAAGGCGAGATGGGATTTAGAAAAATCTAAAATTGGTCGTTTGAAACAAATTAAAGAAGAA ATAGAAAAGTATAAAAATTTAGAAGCGGAAGCAGAAAGAAGAGGAGAGATTAATCGAGTGGCTGAGATTCGCTACGGAAA GTTAGTAGATCTTCAAAAAGAACTCGAATCCGCAAACGAAGAATTAAAAAAACAAGAAAGTGCTTCCAGACTTTTAAAAG AAGAAGTCTCCGAAGAGGATATAGCGAATATAGTCTCTCGTTGGACTGGAATTCCAGTTTCTAAAATGCTTCAAGGCGAA AGGGCAAAACTTCTTTTGATGGAGGATGTATTAAAAACCAAAGTGATCGGACAGGATCATGCTCTTAGACTCGTTTCGGA AGCGGTACAGAGATCTAGGGCCGGAATTGCAGATCCAAATCGTCCCATAGGAACGTTTTTATTTCTTGGACCTACTGGAG TAGGAAAGACCGAAACTGCAAAAGCACTCGCCGAATTCTTGTTTGACGATGTAAACGCGATGACCCGGATCGATATGAGT GAATACATGGAGGCTCATTCCGTAGCCAGGCTGATCGGTGCACCTCCGGGTTATGTAGGATACGATGAAGGAGGACAGCT TACGGAAGCGGTTCGAAGAAGACCATATTCTTTGATACTTTTTGACGAGATTGAAAAAGCAAATCCGGAAGTATTCAACA TTTTCCTTCAGATTTTAGATGAAGGAAGATTGACCGATGGAAAGGGACGTAACGTTGATTTTAAGAATACGGTGATCATT CTTACTTCGAATATAGGCTCCGAAATTTTAGGATCTTCTGAATACACTTCGGAAGAAAAAGAAAGATTGGTGGAACAAAG ATTAAAAAAGCATTTTAAACCAGAATTTTTAAATCGAATTGACGAAGTAATTTTGTTTCATTCGATTACGGATTCCGTGA TTCATAAAATTGCGGATATTCAATTAGAAGGTTTGAGACAAAAGGCGAAAGAAAACGGGCTGGACGTAAGTTTTACAAAC GAGTTAAAAGATTATGTTTCTAAAGCCGGTTTTGACGCAGAATATGGAGCCAGACCTCTCAAACGTTTGATCCAAAGAGA AGTAGGAAATGCACTGAGTCGATATATATTAGACGGTAAGTTTACAAACGGGCAAAACGTAACCGTGGATTATAGACAGG GAAAGGTAGTTGTTGTAGTTTAA Protein sequence : MKLDKLTSKLNEAIYNAQASAEKLGNPEISEEHILKEVLSQPDGLVPLLISKLNLSPKSFLESTENALGKQPKVGGNTSA DVGFSRSAVSLLKAADEVRKELKDEYLSTDHILLGLMKNGTGSLKTEFLKLGLEYHKLLKITLENRKGKTIMDDSPEGKT DALAKYAKNLNELAKQGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLANKIVQGEVPEGIKNKTLY TLDLGSMIAGAKYRGEFEDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGELRCIGATTLKE YQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDSALIAAATLSNRYISDRFLPDKAVDLIDEAS SKMRIEIDSMPEELDRANKRIQSLKIEREALKKEQDTASKERLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEE IEKYKNLEAEAERRGEINRVAEIRYGKLVDLQKELESANEELKKQESASRLLKEEVSEEDIANIVSRWTGIPVSKMLQGE RAKLLLMEDVLKTKVIGQDHALRLVSEAVQRSRAGIADPNRPIGTFLFLGPTGVGKTETAKALAEFLFDDVNAMTRIDMS EYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVII LTSNIGSEILGSSEYTSEEKERLVEQRLKKHFKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTN ELKDYVSKAGFDAEYGARPLKRLIQREVGNALSRYILDGKFTNGQNVTVDYRQGKVVVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001955.1 | ATP-dependent protease | VFG0079 | Protein | 3e-158 | 44 |
| clpB | YP_001955.1 | ATP-dependent protease | VFG2084 | Protein | 5e-112 | 42 |
