Gene Information

Name : LIC10518 (LIC10518)
Accession : YP_000502.1
Strain :
Genome accession: NC_005823
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 624124 - 624915 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
GTGTTTCGTTTGTTACAAGTAAAAAATTTAAATAAGTCTTATTTAGTTTCCGGAAAAAAACTAGAAGTGTTAAAAGACGT
CTCGTTTCAAATTGAAGAGGGTGAATTCATTGCAATCATAGGACCTTCTGGTTCAGGAAAGTCTACTTTGCTTGCAATTT
CAGCGGGTTTAGATCGTCCTGACAACGGAGAAATCATGTTAGACGGCGTTCCTCTTCTTCAAAAAGACGAAGACGAGCTT
GCTAAACTAAGAGGGGAGAAAATAGGTTTTATCTTTCAGAATTTTCAGTTGATAAAATCTCTCAATGCATTGGAAAACGT
CTCGTTACCTCTTGTCTTAAATTCAAAATTGAGTTCTACGGAGATTAAAGATAAAGCTTTAACTTGGTTGGAAAAAGTTT
CTATGAAAGAAAGAGCGTCCAACTTTCCGGGACAACTTTCCGGAGGAGAAGAACAAAGGATAGCAATTGCAAGATCTTTT
ATACACAATCCTAAAATTCTTTTTGCAGACGAACCTACGGCTAACTTGGATAAAAAAAATGGTGAAACGGTAATGAATTT
ACTCGCAGAGTTGAATCAAAAAACTTCTTCTACTTTGATTGTAGTTACTCATGATCGCTCCGTTGCGGAACTTGCAGATC
GTATATTAGAAATGAGTGATGGACGCATTATTAAAGAAATGTATGGAAAGAAAAAAAAATCTTTAAATAAACCAAAAATT
CTTTCTTCAGAAAAAAAGTCCGTATCTAAACATACTTCTACAAAAAGAAAAGTTTCTGCTAAAAAAAGATGA

Protein sequence : 
MFRLLQVKNLNKSYLVSGKKLEVLKDVSFQIEEGEFIAIIGPSGSGKSTLLAISAGLDRPDNGEIMLDGVPLLQKDEDEL
AKLRGEKIGFIFQNFQLIKSLNALENVSLPLVLNSKLSSTEIKDKALTWLEKVSMKERASNFPGQLSGGEEQRIAIARSF
IHNPKILFADEPTANLDKKNGETVMNLLAELNQKTSSTLIVVTHDRSVAELADRILEMSDGRIIKEMYGKKKKSLNKPKI
LSSEKKSVSKHTSTKRKVSAKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIC10518 YP_000502.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-45 46
LIC10518 YP_000502.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-41 44
LIC10518 YP_000502.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-39 43
LIC10518 YP_000502.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-37 41