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Name : rnhA (TTC1191) Accession : YP_005160.1 Strain : Thermus thermophilus HB27 Genome accession: NC_005835 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 1155420 - 1155920 bp Length : 501 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGAACCCCTCCCCCAGGAAACGCGTGGCCCTCTTCACCGACGGGGCCTGCCTGGGCAACCCCGGGCCCGGGGGGTGGGC GGCCCTCCTCCGCTTCAACGCCCACGAGAAGCTCCTCTCCGGGGGAGAGGCCTGCACCACCAACAACCGCATGGAGCTCA AGGCGGCCATAGAGGGCCTAAAGGCCCTCAAGGAGCCTTGCGAGGTGGACCTCTACACCGACAGCCACTACCTCAAGAAG GCCTTCACCGAGGGCTGGCTGGAAGGCTGGCGGAAAAGGGGCTGGCGGACGGCGGAGGGCAAGCCCGTGAAAAACCGCGA CCTCTGGGAGGCCCTCCTCCTCGCCATGGCCCCCCACCGGGTGCGCTTCCACTTCGTGAAGGGGCACACGGGCCACCCGG AGAACGAACGGGTGGACCGGGAGGCGAGGCGCCAGGCCCAGTCCCAGGCCAAGACGCCCTGCCCGCCCCAGGCCCCCACG CTTTTCCACGAAGAGGCATAA Protein sequence : MNPSPRKRVALFTDGACLGNPGPGGWAALLRFNAHEKLLSGGEACTTNNRMELKAAIEGLKALKEPCEVDLYTDSHYLKK AFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARRQAQSQAKTPCPPQAPT LFHEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-31 | 54 |
