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Name : secD (ACIAD0588) Accession : YP_045334.1 Strain : Acinetobacter sp. ADP1 Genome accession: NC_005966 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 576898 - 578799 bp Length : 1902 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCGTTACCCTGCATGGAAATATGTGCTGATCATTGTTGTCTTGATTATCAGCACTTTATACGCACTGCCAAGTTTGTA TCCAGACGAGCCTGCTGTTCAGATTTCTGGTGCCAAAGCCGGTACTCAAATCGACCAGAGCATGGTGCAAAAAGCAGAGC AAATTTTAAAAACTGCCAACATCACCAGTCATGACAACAGCTTTGCCAATAATGCTGCCCTGTTACGTCTTAACTCATCG GAAGATCAGCTCAAGGCACAGGATGTATTGCGTCGTGATTTAGGCGACAACTATGTGGTGGCGTTAAACCTTGCCCCAAC CACGCCAGAATGGCTTCAGAAAATTGGTGCCAAACCAATGAAACTGGGCCTCGACTTACGTGGTGGCGTACACTTCTTGC TCGAAGTGGACATGAACAAGGCGATTGCGCAGCGCATGGAAACGTCGGTCAGTGATATTCGCCGCCAATTCCGCGACAAC AATATCAAGTTCAATAGCTTATCGCTTAACAACAATGCGATTGTGCTGCAATTTGCAAATAACGCAGATCGCGACACGGC GATGGACTTTTTACGTCGTAATGGCAACGAATACACACAACAGGCGGTCGCAACGGCAACTGGTGCATCACTGCGTCTGA GCTATACCGATGCTCGTCGTCAGGAAATCGAGTCGTATGCGGTTAACCAAAACTTAACCACATTGCGTAATCGTATTAAC GAGTTGGGCGTGGCTGAAGCTTTGGTTCAAACCCAAGGCAGCAACCGTATTGTGGTGGAATTGCCGGGCGTTCAGGATAC TGCTGAAGCCAAGCGTGTTCTGGGTCGTACGGCCAATCTTGAGTTCCGTTTGGTTGCCGATCAAAATGATCAATATATCG ACCCATATACCGGTAAATATAATGGTCAGCCATTGCCACCGGGCACAGAGTTGTTTGCCTATGAGTCACTCGACAGTGGT CGTCAGTTGTTGCTCAATCGCAACCGCATCTTGACCGGTGAACGCGTGCAAAACGCAAGTTCTGGCTTTAGTCAGGATAC AGGCGGTGCCGAAGTGAATATCACGCTCGACAGCGCTGGCGGTAAGCTCATGGCAGATGCGACACGAAATGCAGTGGGTA AACGTATGGCGGTGTTGTTTATCGAAAATAAACAACGCGTCAGTTATGTGACGGATCCGGCAACTGGTGCACAAACTGAA GTGCGTACACCATTTACGGAATCGGTCATTATCAACGCCGCGACTGTCCAAGCTGTTTTGGGCTCACAGTTCCGAATTAC CGGTCTGGATTCTCCTCAAGAAGCGGCTGAACTGGCGTTGATGCTTCGTGCGGGTGCACTTGCAGCACCGATGTACTTTG TTGAAGAACGCGTGGTTGGTCCAAGTCTTGGTCAGGAAAATATCGACAAAGGGATTCTGTCTACTGAAGTCGGCTTTATT CTGGTCGCGATCTGGATGATCGTGTTCTTCCGCTTGTTCGGTTTGATTGCAAACTTTGCTCTCGTGTTTAACTTGGCAAT GATTCTTACTGTAATGTCGTGGATTGGTGCATCGCTCACCCTACCGGGGATTGCCGGTATCGTCATTACCATCGGGATGG CGGTCGATGCGAACGTACTGATTTGTGAACGAATACGTGAAGAAATCAAATGGGGGGCTTCGCCCAAGCAGGCCATTGTG GCCGGCTATGATCGTGCCTACAACACCATTTTTGACTCGAACTTAACCACATTCTTGGTGGCGTTCATTTTGTTTGCAAT TGGTACAGGTCCAATCAAAGGTTTCGCAGTGACGCTGATGATTGGTATTGTCTGCTCGATGTTTACTGCCATTACCGTGA CCCGTGCAATTGTACAGCTCATTTATGGCAAACGTCGTAACTTGAAAAAGTTGAGCATATAA Protein sequence : MRYPAWKYVLIIVVLIISTLYALPSLYPDEPAVQISGAKAGTQIDQSMVQKAEQILKTANITSHDNSFANNAALLRLNSS EDQLKAQDVLRRDLGDNYVVALNLAPTTPEWLQKIGAKPMKLGLDLRGGVHFLLEVDMNKAIAQRMETSVSDIRRQFRDN NIKFNSLSLNNNAIVLQFANNADRDTAMDFLRRNGNEYTQQAVATATGASLRLSYTDARRQEIESYAVNQNLTTLRNRIN ELGVAEALVQTQGSNRIVVELPGVQDTAEAKRVLGRTANLEFRLVADQNDQYIDPYTGKYNGQPLPPGTELFAYESLDSG RQLLLNRNRILTGERVQNASSGFSQDTGGAEVNITLDSAGGKLMADATRNAVGKRMAVLFIENKQRVSYVTDPATGAQTE VRTPFTESVIINAATVQAVLGSQFRITGLDSPQEAAELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGILSTEVGFI LVAIWMIVFFRLFGLIANFALVFNLAMILTVMSWIGASLTLPGIAGIVITIGMAVDANVLICERIREEIKWGASPKQAIV AGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVTLMIGIVCSMFTAITVTRAIVQLIYGKRRNLKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-144 | 52 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-144 | 52 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-144 | 52 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-144 | 52 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-144 | 52 |
