Gene Information

Name : 16S_rRNA (DPr01)
Accession : -
Strain : Desulfotalea psychrophila LSv54
Genome accession: NC_006138
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 806221 - 807760 bp
Length : 1540 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGCGAACGAGTTTTTCGAAAC
TCTAGTAGAGTGGCGCACGGGTGAGTAACGCGTAAGTAATCTACCCTGATATCTGGGATAACAATTCGAAAGGATTGCTA
ATACCGGATACGTTGATTTATCAAGAAAGATGGCCTCTTCATGAAAGCTATTGTATCGGGAGGAGCTTGCGTACCATTAG
CTAGTTGGTGGGGTAATGGCCTACCAAGGCGACGATGGTTAGCGGGTCTGAGAGGATGATCCGCCACACTGGAACTGAAA
CACGGACCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCGACGCCGCGTGG
ATGATGAAGGCCTTCGGGTCGTAAAATCCTGTCAGATGGGAAGAAATGGTAATGAGCTAATACCTCGTTACTTTGACGGT
ACCATCAAAGGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGTGCAAGCGTTGTTCGGAATTACTG
GGCGTAAAGCGCGCGTAGGCGGCTTTTTAAGTCAGATGTGAAAGTCCTCGGCTCAACCGAGGAAGTGCATTTGAAACTGG
GGAGCTTGAGTACTGGAGGGGATGGTGGAATTCCCGGTGTAGAGGTGAAATTCGTAGATATCGGGAGGAATACCGGTGGC
GAAGGCGACCATCTGGCCAGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC
ACGCCGTAAACGATGTCAACTAGGTGTTGGAGTGGTTAATCGCTTCATTGCCGGAGCTAACGCATTAAGTTGACCGCCTG
GGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGAC
GCAACGCGCAGAACCTTACCTGGTCTTGACATCTCGGAAATCTCTTGGAAACAGGAGAGTGCCTCTTGAGGAATCCGATG
ACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGTCTCTA
GTTGCCATCATTAAGTTGGGCACTCTAGAGAGACTGCCGGTGTCAAACCGGAGGAAGGTAGGGATGACGTCAAGTCCTCA
TGGCCTTTATGACCAGGGCTACACACGTACTACAATGGCATAGACAAAGGGCAGCAACACAGCGATGTGAAGCCAATCCC
ATAAACTATGTCTCAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGTAGATCAGCAT
GCTACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGAGTTGGTTGTACCAGAAGCAGTTGAGC
TAACCCTTCGGGGGGGCAGGCTGCCAAGGTATGGCTGGTAACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGGAACCT
GGGGCTGGATCACCTCCTTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-160 87.3