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Name : secF (RT0022) Accession : YP_066992.1 Strain : Rickettsia typhi Wilmington Genome accession: NC_006142 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 24146 - 25072 bp Length : 927 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGCAAATTTATCCTTTAAGGTTTGTACCAAATAAAATCAATTTTGATTTTATGAATTTTAAAAAAGTAAGTTATAGTTT CTCAATTATTTTATCACTTATTAGCTTAATTTGGATCGGGATATATAAGTTTAATTTCGGTATTGATTTTGTAGGAGGTA TAGTTATTGAAGTAAGACTTGATAGAGCACCTGATTTGCCAAAAATGCGAGCTGTTTTAAGTGCACTTGGAATAGGTGAG GTGGTCTTACAAAATTTTGAGAGTGAACATGATTTATCGATTAGATTTGGTAGTAGTAGTGAAGAAAATCTCATGAAAAA TATTGACATAATTAAGACATCTTTGCGAAATAATTTTCCATATAATTTTGAATATCGTAAGGTAGATTTTGTTGGTCCGC AGGTTGGTAGACATCTAATAGAAGCAGGGGCTATGGCTATGCTATTCTCTTTCTTAGCGATTATGGTTTATATTGGAGTA CGTTTTGAGTGGTACTTCGGTTTTGGTATACTTATTGCTTTAGTTCATGACGTAATACTAGCTCTTGGGTTTATGAGTAT AACTAAGCTTGATTTTAACTTAAGTACTATTGCTGCAGTATTAACTATAATAGGTTATTCCGTTAATGATTCAGTAGTAA TATACGATAGGATTAGAGAAAATTTGCGTAAATATCATAAAAAAAATATCACAGAAATTATTAATTTAAGTATTAATGAG ACTTTATCAAGAACTATTTTGACAGTAATTACTACACTACTTGCAAATTTAGCTCTTATTCTTTTTGGTGGTAAAGCGAT TCATAGTTTTAGCGTACTTGTATTTTTTGGAATAATAGCTGGTACTTATTCATCAATTTTTATCTCTGCTCCAATACTTA CAATATTTGCTAATAGGAAGTTTAATAAAAAAGTAATAGAAAGGTAA Protein sequence : MQIYPLRFVPNKINFDFMNFKKVSYSFSIILSLISLIWIGIYKFNFGIDFVGGIVIEVRLDRAPDLPKMRAVLSALGIGE VVLQNFESEHDLSIRFGSSSEENLMKNIDIIKTSLRNNFPYNFEYRKVDFVGPQVGRHLIEAGAMAMLFSFLAIMVYIGV RFEWYFGFGILIALVHDVILALGFMSITKLDFNLSTIAAVLTIIGYSVNDSVVIYDRIRENLRKYHKKNITEIINLSINE TLSRTILTVITTLLANLALILFGGKAIHSFSVLVFFGIIAGTYSSIFISAPILTIFANRKFNKKVIER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 6e-41 | 42 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 4e-41 | 42 |
