|
Name : tgt (RT0707) Accession : YP_067648.1 Strain : Rickettsia typhi Wilmington Genome accession: NC_006142 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 903688 - 904773 bp Length : 1086 bp Strand : - Note : Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : GTGTCAAAATTTTCTTTTACTATTCATAGTAACTATAAAAAAGCTAGAAGTGGTGTGATTACCACTGCTCATGGTAAAAT TCGCACACCAACTTTTATGCCAGTTGGGACTAGAGGTACAGTTAAGGCAATGTTGACTGAATCGGTAGTTGAGACCGGAG CAGATATATTACTTGGCAATACTTACCACTTAATGTTGCAGCCAAGTGCTGAGCGTATAGCATATCTTGGTGGTTTGCAT AAATTTATGAATTGGGATAAGCCTATACTCACTGATTCCGGTGGTTTTCAGGTAATGTCGTTATCGAAGTTACGCAAGAT AACTGAAGAGGGGGTAAGCTTCAGATCTCATATTAATGGTAATAAATATATGTTAACGCCTGAGTATTCCACTGAAATAC AATATTTACTCGGTAGTACAATAACTATGGCACTTGATGAATGCACGCCTTATCCTTCAACTTTTGAAGAAGCCAAAACT TCTATGAATCTTACGACTAGATGGGCAAATAGATCACGTGATGCTTTTGTTAAGCGCGAAGGCTATGCACAATTTGGTAT TATTCAGGGCAGTGTTTATAAAGAATTACGTGAGCAATCGGTGAAAGATTTAGTAAAATTCGATTTTGATGGTTATGCTA TAGGAGGGCTTGCAGTAGGTGAGGGGCAGGAACTTATGTTTAAAGTTCTTGATTATGTTTCTGATTTTTTGCCACAAAAT AAACCACGTTATTTAATGGGAGTTGGGAAGCCTGCTGATATTATTGGTGCAGTTAGTAGAGGTATAGATATGTTTGATTG TGTAATCCCAACTCGTTCAGGTCGTAATGGTCAGGCTTTTACAAAATATGGTACAGTTAATATACGCAATAGCAAATATG CTGAGGATAAAGCGCCGCTTGAGTATGATTGTAAATGTCCTGCTTGCACTAATTACACGAAGGCTTATTTGCATCATTTA GTTAGAATCCGTGAGATACTTGGTCCTATGCTAATGACATGGCATAATTTAACATATTTTCAAAATCTCATGAGTCGTAT TAGAGCATATATTAAACTAGGTAAAGATTTTGATTTTGTAAATTAA Protein sequence : MSKFSFTIHSNYKKARSGVITTAHGKIRTPTFMPVGTRGTVKAMLTESVVETGADILLGNTYHLMLQPSAERIAYLGGLH KFMNWDKPILTDSGGFQVMSLSKLRKITEEGVSFRSHINGNKYMLTPEYSTEIQYLLGSTITMALDECTPYPSTFEEAKT SMNLTTRWANRSRDAFVKREGYAQFGIIQGSVYKELREQSVKDLVKFDFDGYAIGGLAVGEGQELMFKVLDYVSDFLPQN KPRYLMGVGKPADIIGAVSRGIDMFDCVIPTRSGRNGQAFTKYGTVNIRNSKYAEDKAPLEYDCKCPACTNYTKAYLHHL VRIREILGPMLMTWHNLTYFQNLMSRIRAYIKLGKDFDFVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 51 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 51 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 4e-86 | 51 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 4e-86 | 51 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 5e-86 | 51 |
