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Name : dnaQ (RT0718) Accession : YP_067658.1 Strain : Rickettsia typhi Wilmington Genome accession: NC_006142 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 912298 - 912987 bp Length : 690 bp Strand : + Note : 3'-5' exonuclease of DNA polymerase III DNA sequence : ATGTCAAGTTTAAGAGAAATAATTTTAGATACTGAAACTACGGGACTTGATCCGCAACAAGGTCATCGCATCATTGAGAT CGGTGCAATTGAGATGGTGAATAAGGTATTAACAGGCAAGCATTTTCATTGTTATATTAATCCTGAACGCGATATGCCTT TCGAAGCTTATAAGATTCACGGTATCTCAGGAGAATTTTTAAAAGATAAACCTCTGTTTCATACAATAGCCAATGATTTT TTAAAGTTTATAGCAGATAGTACACTTATTATTCATAATGCTCCTTTCGATATTAAATTTCTAAATCATGAATTATCTTT ATTAAAGAGAACCGAAATTAAATTTTTGGAACTAACGAATACTATAGATACTCTCGTTATGGCAAGGAGTATGTTTCCTG GAGCAAGATATAGTCTTGATGCATTATGTAAAAGATTTAAAGTTGATAATTCAGGTCGGCAACTTCATGGAGCTTTAAAA GATGCAGCATTACTTGCAGAAGTGTATGTGGCACTCACAGGAGGTAGACAATCTACTTTTAAGATGATTGATAAACCTAA TGAAATAAACAACTTAACAGTTAAGTGTATAGAGGTTCAGAAAATAAAAAGAAGTATTGTGGTTAAGCCTACTAAAGAAG AATTACAAAAACATAAAGAGTTCATAGATAAGATTTTAATACAGGCTTAA Protein sequence : MSSLREIILDTETTGLDPQQGHRIIEIGAIEMVNKVLTGKHFHCYINPERDMPFEAYKIHGISGEFLKDKPLFHTIANDF LKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARSMFPGARYSLDALCKRFKVDNSGRQLHGALK DAALLAEVYVALTGGRQSTFKMIDKPNEINNLTVKCIEVQKIKRSIVVKPTKEELQKHKEFIDKILIQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 1e-45 | 49 |
