|
Name : YPTB1298 (YPTB1298) Accession : YP_069830.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : nucleoid-associated protein NdpA Function : - COG functional category : R : General function prediction only COG ID : COG3081 EC number : - Position : 1545669 - 1546673 bp Length : 1005 bp Strand : + Note : similar to Yersinia pestis YPO1262 nucleoid-associated protein (99.7% evalue=0); Salmonella typhi STY2463 yejK; nucleoid-asociated protein (78.4% evalue=1.E-147) DNA sequence : ATGAGTCTGGATATTGACCAGATAGCCTTACATCAGCTTATTAAACGTGATGAACAAACGCTTGATGTGGTGTTGCGGGA TTCTTTGTTACCGACCAATGCGGTAGTTGAAGAGATGATGGCCGAACTGCACCGCGTTTACAGTGCCAAAAGTAAAGCTT ACGGGCTATTTAATGAGCAGAGTGAACTGGCTGATGCACTGAAACGAAGCCGTAAGGGTGATGAAGATTTCCTTAGCTTT AGCCGTGCAGCAACCGGTCGTTTACGTGACGAGCTAGCTAAGTATCCGTTTGCCGAGGGCGGGGTGGTGCTGTTTTGCCA GTACCGTTATTTGGCCGTGGAGTATTTACTGATCTCTGTGCTAAGCAGCTGTCATAGTATGCGCGTAAACGAACAGCTCG ATCTGAGTACTACTCATTATCTTGATATCAACCGCGCGGATATTGTCGCCCGGATTGATTTAACCGAGTGGGAAACCAAC CCGGAATCAACGCGTTATCTGACTTTCCTTAAAGGGCGGGTAGGGCGAAAAGTGTCTGACTTCTTTATGGATTTTCTGTC CGCTGCTGAAGGCTTAGATACCAAAGCGCAAAACCGGGGTTTATTGCAGGCGGTTGATGATTACTGCGCCGATGCCGAGT TAGGCAAAAATGAGCGTCAGGCCTACCGTCAGCAGGTTTACAGCTATTGTAATGAGCAACTGCGAGCCGGTGAAGAGATT GCCTTACAGGTGTTGGCTCAAGAGTTACCGAAACTGGGCGAAAAAGATTTCCAGCAATTTTCGGCTGAACAAGGTTATGC ATTGGAAGAGAGTTTCCCGGCGGATCGAGGGACTTTGCGTCAGTTAACCAAGTTTGCGGGCAGTGGTGGCGGTTTGAGTA TTAATTTTGATGCGCTGCTGCTGGATGAGCGGATTTTCTGGGATGCGGCAACCGATACGCTGACCATTAAAGGCACTCCG CCGAATTTGCGTGATCAATTACAGCGCCGTGCTGGCAGTAAGTAA Protein sequence : MSLDIDQIALHQLIKRDEQTLDVVLRDSLLPTNAVVEEMMAELHRVYSAKSKAYGLFNEQSELADALKRSRKGDEDFLSF SRAATGRLRDELAKYPFAEGGVVLFCQYRYLAVEYLLISVLSSCHSMRVNEQLDLSTTHYLDINRADIVARIDLTEWETN PESTRYLTFLKGRVGRKVSDFFMDFLSAAEGLDTKAQNRGLLQAVDDYCADAELGKNERQAYRQQVYSYCNEQLRAGEEI ALQVLAQELPKLGEKDFQQFSAEQGYALEESFPADRGTLRQLTKFAGSGGGLSINFDALLLDERIFWDAATDTLTIKGTP PNLRDQLQRRAGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01050 | YP_001437154.1 | nucleoid-associated protein NdpA | Not tested | Not named | Protein | 1e-132 | 82 |
