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Name : ccmF (YPTB2644) Accession : YP_071154.1 Strain : Yersinia pseudotuberculosis IP 32953 Genome accession: NC_006155 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3123082 - 3125052 bp Length : 1971 bp Strand : - Note : similar to Yersinia pestis YPO2739 ccmF; cytochrome c-type biogenesis protein (99.8% evalue=0); Escherichia coli b2196 ccmF; cytochrome C-type biogenesis protein ccmF (70.9% evalue=0) DNA sequence : ATGATCCCTGAAATTGGCAGTTTTTTATTATGTTTGGCGTTGGCGATTTCACTGCTGCTGAGTCTGTATCCACAATGGGG AGCCGCGCGTCAGGATGCCCGTATGATGGCGGTTGGCAGGCCACTGACTTATGGCATGTTTGCCGCGATCACGTTGTCAT TTATCTGTCTGATATATGCATTTGTGGTAAATGATTTTACCGTCTCCTATGTCGCGGCGAATTCCAACTCATATTTGCCG ATTTATTACCGTATTGCCGCGAGTTGGGGAGCGCACGAAGGCTCCTTATTATTATGGGTATTGCTGCTCAGTTGTTGGTC ATTGGCGGTAGCGCTGTTTAGCCGTTCGATGCCAGAGGATGCGGTGGCGCGGGTGTTATCCGTGCTGGGAATGATTACCG GCGGTTTTCTGCTATTTATTATTCTGACGTCTAACCCGTTCTCTCGCACATTACCTGATTTTCCTATTGATGGCCGCGAT CTGAACCCGCTACTACAAGATGTTGGGTTGATTTTCCATCCCCCGCTGCTCTACATGGGGTATGTCGGTTTCTCCGTCGC GTTTGCTTTTGCAATTGCATCATTAATGGCCGGTAGGCTCGACAGTGCCTGGGCGCGTTGGTCACGTCCATGGACTCAGG CCGCATGGGTTTTCCTAACGCTTGGCATCGTACTTGGCTCAGCGTGGGCTTATTATGAATTGGGGTGGGGCGGCTGGTGG TTCTGGGACCCGGTCGAAAATGCCTCCTTTATGCCGTGGCTGGCAGGTACCGCACTGATTCACTCACTGGCTGTCACGGA GAAGCGCGGTACTTTCAAAGCGTGGACGGTATTGTTGGCGATCACCGCGTTCTCCTTGTGTTTGATGGGGACATTCTTAG TCCGCTCAGGCGTGCTGGTTTCGGTGCACTCCTTTGCCTCTGATCCGGCCCGTGGCATGTTTATTCTGGCCTATCTGGTG ATTGTGATTGGCGGTTCCCTGCTGCTGTATGCGGTAAAAGGCGCGCAGGTGCGCAGCCGGACTCAGCATGAAGTCTTTTC CCGCGAGACTTTCCTGCTCGGCAACAATGTGTTGCTTATTGCCGCAATGCTCGTGGTGTTGCTGGGAACATTACTGCCAC TGGTTCACAAACAGTTGGGATTGGGCAGTATCTCCATTGGTGAACCGTTCTTTAATACGATGTTCACTTGGTTAATGGCT CCGATGGCATTGCTCATGGGGATAGGGCCGCTCGTGCGTTGGCGTCGTGATGAACCGAGCAAACTGTGGAAGCGGTTGAG TGTGGCTCTGGTGGTCACTCTGCTGTTATCGATATCCGTACCGTGGCTGCTGCAAGATAGTGTTGCCGGTATGACGGTCG TCGGGTTGATGATGGCCATTTGGGTGATCATCCTGACATTAATGGAATTGCACGAACGGGCCACCCATCGTTATGGCTTC TGGCGTGGGTTGACTCACCTTTCCCGTAGCCACTGGGGCATGGTGTTGGGGCATCTCGGGGTGGCGGTTACGGTAATTGG GATTGCGTTTAGCCAGAATTACAGTGTCGAACGCGATGTGCGCATGAAGGCCGGTGATAGTATCGATATCCATGATTATC ACTTCACTTTTCGCGATGTCCACGATATCAAAGGGCCTAACTATACCGGCGGCGTTGGCATTATTGATGTCACCCGTAAT GGTAAATTGGAGGCCACATTACATGCAGAAAAACGCTATTACAGTGTCGCCCGCTCAATGATGACTGAAGCAGCCATTGA TGGGGGGCTGACCCGCGATCTTTATGCCGCCTTGGGTGAAGAGCTGGGCGATGGCTCATGGGCGGTCCGCTTGTATTACA AACCTTTTGTGCGTTGGATATGGTTTGGCGGGATCTTTATGGCCGTCGGCGGCATCTTCTGTATGCTCGATCCGCGCTAT CGGATGAGTAAAAAGCTAAAACGCGGTGCGATACCGGAGGCAGAGTCATGA Protein sequence : MIPEIGSFLLCLALAISLLLSLYPQWGAARQDARMMAVGRPLTYGMFAAITLSFICLIYAFVVNDFTVSYVAANSNSYLP IYYRIAASWGAHEGSLLLWVLLLSCWSLAVALFSRSMPEDAVARVLSVLGMITGGFLLFIILTSNPFSRTLPDFPIDGRD LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDSAWARWSRPWTQAAWVFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALIHSLAVTEKRGTFKAWTVLLAITAFSLCLMGTFLVRSGVLVSVHSFASDPARGMFILAYLV IVIGGSLLLYAVKGAQVRSRTQHEVFSRETFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA PMALLMGIGPLVRWRRDEPSKLWKRLSVALVVTLLLSISVPWLLQDSVAGMTVVGLMMAIWVIILTLMELHERATHRYGF WRGLTHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKAGDSIDIHDYHFTFRDVHDIKGPNYTGGVGIIDVTRN GKLEATLHAEKRYYSVARSMMTEAAIDGGLTRDLYAALGEELGDGSWAVRLYYKPFVRWIWFGGIFMAVGGIFCMLDPRY RMSKKLKRGAIPEAES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-180 | 72 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-131 | 53 |
