|
Name : tgt (MS1559) Accession : YP_088751.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 1553492 - 1554631 bp Length : 1140 bp Strand : + Note : Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) DNA sequence : ATGAAATTCAAACTAAAAACCACCAGCGGTGCGGCCCGTCGCGGCGAATTAACCTTCAATCGCCCGCAAGGGGAATTTAG CGTACAAACTCCGGCATTTATGCCGGTCGGAACTTACGGCACGGTGAAAGGTATGACACCGGAAGAAGTACGCGCCACCG GAGCGGAAATTCTGCTCGGTAACACCTTCCATTTATGGTTACGTCCGGGACAGGAAGTGATGCGTAAACATGGTGACTTA CATGATTTTATGCAATGGCACCGCCCGATTTTAACGGACTCCGGCGGTTTCCAGGTGTTCAGTTTGGGGAAATTACGCAA AATCACGGAAGAAGGGGTGAAATTCCAAAATCCGATTAACGGCGAACGTATTTTCCTTTCACCTGAAAAATCTATGGAAA TTCAGTATGATTTGGGTTCGGACATTGTGATGATCTTCGACGAATGCACGCCTTATCCCGCAACTTTTGATTATGCCAAG AAATCAATGGAAATGTCTTTACGCTGGGCAAAACGCAGCCGTGACCGTTTCGATGAATTAGGTAATAAAAACGCATTATT CGGTATCGTGCAAGGCGGTACCTTTGAAGAATTGCGTAAAGTTTCCGCCGAAAACCTGATCAATATCGGTTTTGACGGTT ACGCGGTAGGCGGTTTGGCAGTGGGCGAGCCGAAAGAAGAAATGCACCGCATTTTGGAATTCACGACGCCGTTATTGCCG GCGGATAAACCGCGCTATTTGATGGGTGTCGGCAAACCGGAAGATTTAGTGGAAGGGGTGCGTCGCGGTATTGATATGTT CGACTGCGTGATGCCTACCCGCAACGCACGTAACGGACATTTATTCGTCACCGACGGTATTGTGAAGATCCGTAACGCTA AATATAAAGACGACACCAGTCCGTTAGATCCGCATTGCGACTGCTACACCTGTCAACATTACACTAAATCTTATCTATAT CATTTGGATAAATGCGGTGAAATTTTGGGCGCGCGTTTGAATACCATTCATAATTTACGTTATTACCAACGTTTAATGGA ACAAATCCGCACGGCTATCGAACAAGATCGTTTTGATGATTTTGTACAAGAATTCTATGCTCGAATGGATAAACCCGTAC CGCCGTTGCAGAAAGCTTAA Protein sequence : MKFKLKTTSGAARRGELTFNRPQGEFSVQTPAFMPVGTYGTVKGMTPEEVRATGAEILLGNTFHLWLRPGQEVMRKHGDL HDFMQWHRPILTDSGGFQVFSLGKLRKITEEGVKFQNPINGERIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK KSMEMSLRWAKRSRDRFDELGNKNALFGIVQGGTFEELRKVSAENLINIGFDGYAVGGLAVGEPKEEMHRILEFTTPLLP ADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGIVKIRNAKYKDDTSPLDPHCDCYTCQHYTKSYLY HLDKCGEILGARLNTIHNLRYYQRLMEQIRTAIEQDRFDDFVQEFYARMDKPVPPLQKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 6e-127 | 67 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 6e-127 | 67 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 6e-127 | 67 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 6e-127 | 67 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 6e-127 | 67 |
