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Name : rnhA (MS1571) Accession : YP_088763.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 1566286 - 1566762 bp Length : 477 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : TTGTATCAAATTATGCGTAAACAAATTGAAATTTTTACAGACGGATCTTGCCTGGGCAATCCCGGTGCCGGCGGCATTGG TGTCGTACTGCGCTATAAGCAGCATGAAAAAACCCTCTCGCAGGGATATTTTAAAACCACCAATAACCGCATGGAACTGC GCGCCGTGATAGAAGCGCTGAATCTATTAAAAGAGCCTTGCGCCGTTACATTGCACAGCGACAGCCAATATATGAAAAAC GGCATTACTCAATGGATTTTTAACTGGAAAAAGAAAAATTGGAAAGCCAGTAACGGCAAACCGGTTAAAAATCAGGATTT GTGGATGGCGCTTGATAATGCCGTTCAGGCGCATACAATTGACTGGCGTTGGGTAAAAGGCCATTCCGGGCACCGAGAAA ACGAACTATGCGACCAACTGGCAAAGCAAGGGGCGGAAAACCCAACCTTGGAAGACATCGGCTATCAGCCGGACTAA Protein sequence : MYQIMRKQIEIFTDGSCLGNPGAGGIGVVLRYKQHEKTLSQGYFKTTNNRMELRAVIEALNLLKEPCAVTLHSDSQYMKN GITQWIFNWKKKNWKASNGKPVKNQDLWMALDNAVQAHTIDWRWVKGHSGHRENELCDQLAKQGAENPTLEDIGYQPD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-46 | 63 |
