|
Name : ccmF (MS1815) Accession : YP_089006.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : CcmF protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1810281 - 1812215 bp Length : 1935 bp Strand : - Note : Cytochrome c biogenesis factor DNA sequence : ATGATCCCAGAACTCGGCTTTATTGCATTGCTTATTGCATTACTTTCTTCTTTCTTGCTTACGTTAATTCCGCTTGTAGG TATGATAAAACGCAATACGAATTTACTGAGTTATGCCTGGAATTTCAGTTATCTGTTTGCCATTTTCAGCACGATTTCCA TTGCCTGTTTAGCCTATTCTTTTTCGGTTAATGATTTTTCGGTGGAATATGTCGCCGCCCATTCGAATTCACAGCTTCCT CTGTTTTTTAAAATTGCCGCGACCTGGGGCGGGCATGAAGGCTCCATGTTATTCTGGCTGTTTTCATTAAGTTTATGGAC TGCCGCTTTTGCTTTTTTCAGTCGAAAAATTGATCCTGTTTTTTCAGCGCGGACCCTTTCTATTCTCGGTTTTATTTGTT TGAGTTTTGCTATTTTTATTCTGTTTTTTTCCAACCCTTTCATTCGTCAGTTCCCTTTACCGCCGGAAGGGCGGGATCTT AATCCGATGTTGCAAGATATCGGTCTGATTATTCATCCGCCGCTGCTTTATTTGGGTTATGTGGGGTTCGCGGTAAATTT TGCTATGACTTTATCCGTCATGCTAAGCGGACATGTTGATGCCGCTATCGCACGCTGGACAAGAATTTGGGTATTGTTAT CATGGTTCTTCTTAACTTTAGGCATTATGCTCGGTGCATGGTGGGCATATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTGGAAAACGCCTCGTTGATGCCTTGGTTAATCGGTCTGGCGTTATTGCACAGCCTGATAGTTACCGAACA ACGCGGGATTTTCAGCTATTGGACGATACTTTTTTCATTATTTGCCTTTGCTTTCAGCCTGCTTGGCACCTTTATCGTGC GTTCCGGCGTATTAACTTCGGTTCACGCTTTTGCCGTGGACGGCGAACGGGGGACTGCATTATTACTTATTTTCTTCCTG TTAACGGCGTTGGCATTAACCGTTTTCGCCCTTAAAGTCAATTTGCGTCAAAGTGCGGTCCGTTTTTCCGTTTTTTCGAA AGAAAGCTTTTTGTTGTTGGCTAATGTAGTTCTCACTATTGCCACTGTCAGCGTGTTTTTAGGAACTTTTTATCCAATGG TATTTTCGGCGATGGGCTGGGGTTCTATTTCCGTCGGTGCGCCGTATTTTAATAGCATTTTTGTGCCTTTGTTGCTGATT ATGCTTATTGCGATGGTTTTCGTATTAGCTACAAAATGGCAAAAAATGAACCGCACTTTATTGCGGCAAAAATCAATATT GCTTATCCCCGCCCTTCTGATTGCATATTTGATTATTCATTTCACCGTTCGGCAGGATGAAAGTCTGCGCTTTCATTTTT CCGCATTTGTGCTGCTTAGTTTGGCAATTTGGCTGTTGCTTGCAACTTTATGGATAAATTGGCGAAAAATAGGGTTGCGG CGGTCAGGCATGATCCTTGCTCATTGCGGTGTTGCTTTTGCGGTGATTGGTGCGGTGATGTCCGGTTATTTCGGCAGTGA AATCGGCGTACGTTTAGCGCCGCAACAGAGCCAAATGTTAAACGGTTATGAGTTCCGCTATATAGGCTTTACTAATGAGC TAGGTCCTAACTTTACTTCGGAAAAAGCGCATTTTGAAATTTATAAAAATAACCAAAAACTGACCGCACTTTATCCGGAA CGCCGTTATTATGAGGTACGAACTATGAATATGTCGGAAGTGGGTATTCAATGGGGCGTTTTAGGCGATATTTATATTGT CATGGGAGATAAGCTGGCGCCGAATGAGTTCAGTTTTCGCCTGCATTACAAACCTTTTGTCCGCTGGTTATGGCTGGGTG GAATTTTAATGGCATTAGGCGCTTTAGTAGCCGCCGTTAGCCTGGTTCAACGGAAAAACGCCATGGCGTTTTCATCGGCA ATTAAAAAAGAATAA Protein sequence : MIPELGFIALLIALLSSFLLTLIPLVGMIKRNTNLLSYAWNFSYLFAIFSTISIACLAYSFSVNDFSVEYVAAHSNSQLP LFFKIAATWGGHEGSMLFWLFSLSLWTAAFAFFSRKIDPVFSARTLSILGFICLSFAIFILFFSNPFIRQFPLPPEGRDL NPMLQDIGLIIHPPLLYLGYVGFAVNFAMTLSVMLSGHVDAAIARWTRIWVLLSWFFLTLGIMLGAWWAYYELGWGGWWF WDPVENASLMPWLIGLALLHSLIVTEQRGIFSYWTILFSLFAFAFSLLGTFIVRSGVLTSVHAFAVDGERGTALLLIFFL LTALALTVFALKVNLRQSAVRFSVFSKESFLLLANVVLTIATVSVFLGTFYPMVFSAMGWGSISVGAPYFNSIFVPLLLI MLIAMVFVLATKWQKMNRTLLRQKSILLIPALLIAYLIIHFTVRQDESLRFHFSAFVLLSLAIWLLLATLWINWRKIGLR RSGMILAHCGVAFAVIGAVMSGYFGSEIGVRLAPQQSQMLNGYEFRYIGFTNELGPNFTSEKAHFEIYKNNQKLTALYPE RRYYEVRTMNMSEVGIQWGVLGDIYIVMGDKLAPNEFSFRLHYKPFVRWLWLGGILMALGALVAAVSLVQRKNAMAFSSA IKKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-87 | 44 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-88 | 43 |
