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Name : ccmF (MS0606) Accession : YP_087798.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : CcmF protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 566201 - 568147 bp Length : 1947 bp Strand : + Note : Cytochrome c biogenesis factor DNA sequence : ATGATTGCGGAATTAGGTAATTTTGCGTTAGCCCTCGGCTTAGCTATTTCTGTTTTATTAGCGGTTTTTCCGTTATGGGG AGCCGAAAAAGGGAATAAACAATTGATGTCATTGGCACGCCCAATGACTTATGGGTTATTTATTTGTTTAACTTTTGCAT TCGGCGCTTTGTTTTATGCCTTTGCGGTCAATGATTTTTCTATTCAGTATGTCGTAAATAACTCTAATAGCCGCTTGCCG TTGCAATATCGGTTATCCGCAGTGTGGGGGGCTCACGAGGGTTCGTTATTACTATGGATTTGGTTGTTATCGGTCTGGAG TGTCGCTGTTTCATTATTTAGCCGACAACTGCCACAAGAAGCGGTAGCGCGGGTTCTTGGCATTATGGGGTTAGTGACTA TTGGGTTTTTAATCTTTATTTTGTTCACGTCTAACCCTTTTGCGCGTACATTCCCTAATTTGCCGATTGACGGTAAAGAG CTTAATCCAATGTTGCAGGATGTAGGTTTGATTTTTCATCCGCCGCTGCTTTACATGGGTTATGTAGGATTCTCCGTCGC GTTTGCTTTTTCAATCGCCTCATTAATGACAGGAAAATTAGACACCGCATGGGCGCGTTGGTCTCGTCCCTGGACAATGG CGGCTTGGGTGTTTTTAACCGTAGGTATCGTACTTGGTTCCTGGTGGGCTTATTACGAACTTGGCTGGGGCGGCTGGTGG TTCTGGGATCCGGTAGAAAATTCATCCTTAATGCCTTGGCTTGCCGGCACCGCGTTATTGCATTCTTTAGCAGTGACCGA GAAACGGGGAGCGTTCAAAGCCTGGACGGTACTGCTTGCCATTCTTGCCTTTTCGCTTTGCTTATTAGGTACTTTTTTAG TGCGTTCGGGCGTGTTGGTTTCTGTACATGCTTTTGCTTCCGATCCTACGCGCGGTTTATATATTTTGGCCTATTTGATT GTTGTGATTGGCGGTTCATTAACTCTGTATGCTTACAAAGGGGGGCAAATTCGTTCCCGTGATAATGCCGAGCGCTATTC GCGCGAGTCTATGTTGCTGTTAAATAATATTTTATTAATGGCGGCATTGGTTGTAGTGCTGTTGGGTACATTATTGCCGT TAGTTCATAAGCAGTTGGGATTAGGTTCGATTTCCATCGGTGCACCGTTTTTTAATCAAATGTTTTTGGTTTTAATGACG CCGTTCGCTTTGTTATTAGGCATCGGGCCTTTAGTTAAATGGCGTCGGGATAAATTTTCCGCTATCCGTAAGCCGGTTAT TATCAGTTTGTTTTTGATGATTATTCTAGGTTTTGCGTTGCCTTACTTTATCGGCAATAAATTATCCCTAAGTGCGGTAC TTGGTACGATGATGGTGGTGATTATTACTCTGCTAAGCTTGTATGAACTGAAACAACGCGCCGCCCATCGGGACAACTTC TTAATAGGCATTACTAAATTATCACGTTCTCATTGGGGAATGTTTTTAGCTCATTTAGGCGTTGCCATGACTGTTTGGGG CGTGACTTTCAGCCAAAACTTTAGTGTTGAGCGTGACGTAAGAATGTCAGTCGGCGATTCCGTGAACATTGCCGGTTATG AATATAAATTCCAAGGCATACGGGATGCAAACGGACCGAACTATTTAGGCGGCACGGCACAAGTGGATATTTTAAAAGAG GGTAAACTTGAAGGTTCTTTATTTGCCGAAAAACGGTTCTATACGGTAAGCCGCATGACAATGACGGAAGCCGCCATCGA TTGGGGATTTACCCGTGATCTGTATGTGGCGTTAGGCGAGCAGTTAGAGGATAAATCCTGGGCAATGCGTCTATATTACA AACCTTTTATCCGTTGGATTTGGTTTGGCGGCGTCTTTATGGCTCTAGGGGGGGTACTCTGTATGTTCGATCGTCGTTAC CGTTTTTCTAAAATTTTAAATAAATAG Protein sequence : MIAELGNFALALGLAISVLLAVFPLWGAEKGNKQLMSLARPMTYGLFICLTFAFGALFYAFAVNDFSIQYVVNNSNSRLP LQYRLSAVWGAHEGSLLLWIWLLSVWSVAVSLFSRQLPQEAVARVLGIMGLVTIGFLIFILFTSNPFARTFPNLPIDGKE LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFSIASLMTGKLDTAWARWSRPWTMAAWVFLTVGIVLGSWWAYYELGWGGWW FWDPVENSSLMPWLAGTALLHSLAVTEKRGAFKAWTVLLAILAFSLCLLGTFLVRSGVLVSVHAFASDPTRGLYILAYLI VVIGGSLTLYAYKGGQIRSRDNAERYSRESMLLLNNILLMAALVVVLLGTLLPLVHKQLGLGSISIGAPFFNQMFLVLMT PFALLLGIGPLVKWRRDKFSAIRKPVIISLFLMIILGFALPYFIGNKLSLSAVLGTMMVVIITLLSLYELKQRAAHRDNF LIGITKLSRSHWGMFLAHLGVAMTVWGVTFSQNFSVERDVRMSVGDSVNIAGYEYKFQGIRDANGPNYLGGTAQVDILKE GKLEGSLFAEKRFYTVSRMTMTEAAIDWGFTRDLYVALGEQLEDKSWAMRLYYKPFIRWIWFGGVFMALGGVLCMFDRRY RFSKILNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-151 | 62 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-133 | 53 |
