Gene Information

Name : hpaR (BMAA1141)
Accession : YP_105796.1
Strain :
Genome accession: NC_006349
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradative operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 1195876 - 1196313 bp
Length : 438 bp
Strand : +
Note : identified by similarity to SP:Q07095; match to protein family HMM PF01047; match to protein family HMM TIGR02337

DNA sequence :
ATGAATCGTACGTTCGATCACCGCAATCTGGCCATGCTGTTGCTCGAGGCCCGCGAAACGTTGATGGGCCGGTTCCGGCC
GATCCTGAAGGAATTTGCGCTGACGGAGCAGCAATGGCGGATCATTCGCGTGCTGGACGGCGAACCGTCTCATGAGCTCG
AAGCCGGGCAGATCGCGAAGCGCTGCTGCATCCTGAGCCCGAGCCTCACGGGCGTACTGGAGAGAATGGAGCGCGACGGC
CTGATTCGCCGCACGCGCGCGCAGGAGGACCAGCGCAGGCTGATCGTCAGCTTGACGCCGCAAAGTCGTCAGCTCGTCAC
GCAGATCAGCCCGCGCATCGACGAGCAGTATCGGCTCATCGAGCAGCGCTTCGGCGCGGATGCGCTCGGCGAGGTGTACG
CGGCGCTCGACAAACTGATCGACGTCGGCGGCTCGTGA

Protein sequence :
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAKRCCILSPSLTGVLERMERDG
LIRRTRAQEDQRRLIVSLTPQSRQLVTQISPRIDEQYRLIEQRFGADALGEVYAALDKLIDVGGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 1e-27 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaR YP_105796.1 homoprotocatechuate degradative operon repressor BAC0505 Protein 3e-23 41