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Name : glcF (BPSL2845) Accession : YP_109439.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 3407017 - 3408243 bp Length : 1227 bp Strand : + Note : Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SWALL:GLCF_ECOLI (SWALL:P52074) (407 aa) fasta scores: E(): 1.2e-88, 57% id in 407 aa, and to Ralstonia solanacearum probable glycolate oxidase GlcF or rsc2668 or rs045 DNA sequence : ATGCAGACGAACCTCGCCGATTTCATCCGCCACACGCCCGACGGCGACGACGCCGACGCGATCCTGCGCAGGTGCGTGCA CTGCGGCTTCTGCACCGCGACCTGCCCGACCTACCAGTTGCTCGGCGACGAGCTCGACGGCCCGCGCGGACGCATCTACC TGATCAAGCAGATGCTCGAGGGCGCGGAAGTCACGCGCAGCACGCAACAGCACCTCGACCGCTGCCTCACGTGCCGCAGT TGCGAGACGACCTGCCCGTCGGGCGTCGAGTACGGCCGGCTCGTCGACATCGGCCGCAAGGTCGTCGAGACGAAGGTGTC GCGGCCGCTGTCGCAGCGGATCGTGCGGCGCCTGCTCGCGAGCTTCGTGCCGAACGCGGCCGTGTTCGCGCCCGTGATGC GGCTCGGCCAGCATGTGCGGCCGCTGTTGCCGAAGCGGCTGCGCGACAAGGTGCCGCCGCGCGCGCGCCTGCTCGCGTGG CCGAGCGCGCGGCGCGAGCGCCGCGTGCTGATGCTCGCGGGCTGCGTGCAGCCTTCGATGATGCCGAACATCAACATCGC GACCGCGCGCGTGCTGGATGCGCTCGGCATCGAAACCGTGGTCGCGCCGGAAGCCGGCTGCTGCGGCGCGATCCGGCTGC ATCTGGGCTATCACGATGAAGCGCTCGACGATGCGCGACGCAACATCGACGCGTGGTGGCCGCACATCGAGCGCGGCGTC GAAGCGATCGTGATGAACGCGTCCGGCTGCGGCGCGACGGTGCGCGAGTACGCGCACCTGCTGCGCGGCGATCCGGCCTA CGCGGACAAGGCGCGCCGCATCGTCGAGCTGACGAAGGACGCATCCGAGCTGCTCGGCGGCTTCGAGGCCGAGCTGATCG CGCTCACGCGCCGGCGCGGAATCCATACCGTCGCCTATCATCCGCCGTGCACGCTGCAGCACGGCCAGCAGTTGCGCGGC AAGGTCGAGCGGCTGCTGGAGGGGCTCGGCATCGAAGTTCGGCTGCCCGCCGACAGCCATCTGTGCTGCGGCTCCGCGGG CACCTATTCGCTCACGCAGCCGTCGCTCGCGTACAAGCTGCGCAAGCGCAAGCTCGCGAAGCTGCAGGAGACCGAGCCGC AGATGATCGTATCGGCGAACATCGGCTGCATCGCGCATCTGCAAAGCGGCACGGCGGTGCCCGTCGTGCACTGGGTGCAG CTCGTCGAGAATCTGCTGTACGGTTGA Protein sequence : MQTNLADFIRHTPDGDDADAILRRCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGAEVTRSTQQHLDRCLTCRS CETTCPSGVEYGRLVDIGRKVVETKVSRPLSQRIVRRLLASFVPNAAVFAPVMRLGQHVRPLLPKRLRDKVPPRARLLAW PSARRERRVLMLAGCVQPSMMPNINIATARVLDALGIETVVAPEAGCCGAIRLHLGYHDEALDDARRNIDAWWPHIERGV EAIVMNASGCGATVREYAHLLRGDPAYADKARRIVELTKDASELLGGFEAELIALTRRRGIHTVAYHPPCTLQHGQQLRG KVERLLEGLGIEVRLPADSHLCCGSAGTYSLTQPSLAYKLRKRKLAKLQETEPQMIVSANIGCIAHLQSGTAVPVVHWVQ LVENLLYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 6e-108 | 57 |
