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Name : secD (BPSL2871) Accession : YP_109465.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3435478 - 3437502 bp Length : 2025 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTATCCAATCTGGAAATATGTGGTGATGGTCGTGGCGCTCGCCATCGGCTTTCTGTACACATTGCCCAACTT CTTCGGCGAAGCGCCGGCGGTGCAGGTATCGAGCGGCAAGGCCACGGTCAAGCTCGGCGCCGACACGCTCGCGCAGGTCG AAGCAGCGCTCAAGGCCAACCAGGTCGCGGCCGACGACGTCACGTTCGACAATTCCAGCGCCAACGCGACCATCCGCGTG CGCCTGAAGGACACCGACACGCAATTGCGCGTGAAGGACATGCTGCAAAAGACGCTGAACGCCGATCCGAACGATCCGCA GTACGTCGTCGCGTTGAACCTGCAGAGCGCGTCGCCGCGCTGGCTGACCGCGCTGCACGCGCTGCCGATGTATCTCGGCC TCGATCTGCGCGGCGGCGTCCACTTCCTGCTGCAAGTCGACATGACGGGCGCGCTCACGAAGAAGCTCGATTCCGACGCG TCCGACGCCCGCACGCAACTGCGCGACAAGGGCATTCGCGACGGCGGCGTCGCCCGCGTCGATCAGACGGTCGTCGCGAA CTTCGCCGACCAGGACACCGCCGAGCAAGCGCGCAAGCTGCTCGCCTCGTCCGTCTCCGAACTCCAGTGGGCGACGCAGC CGGGCGGCGGCGGCTATCAGGTCGTCGGCACGTTCACGCCGGCCGTCCAGAAGGCCGTCGAGGAAGCGGCGCTCAAGCAG AACCTGACGACGCTGCACAACCGCGTCAACGAACTCGGCGTGTCCGAGCCGATCCTCCAGCAGCAGGGCAACGACCGGAT CGTCGTCGAGCTGCCGGGCGTGCAGGACACCGCGAAGGCGAAGGACATCATCGGCCGCACCGCGACGCTCGAGGCGCGCC TCGCCGATCCGCTGAACACGCACCCGAATCCGAACGATCCGGTGCCGCCGGGCGAGGAACTGTTCACGCAGGGCAACCAG GCGCCGGTGCTGCTCAAGAAGCAGGTGATCTTCACGGGCGACCGCATCATCGACGCGTCCGCGGGCTTCGACGAGCATCA GCGTCCGTCCGTGAACATCCGCCTCGATTCGGCGGGCGGCCGCGCGGTGCGCGCGGTGTCGCGCGAGAACATCGGCAAGC CGATGGCGATGGTGCTGTTCGAGAAGGGCAAGGGCGAAGTGCTGACCGTCGCGACGATCCAGTCGGAGCTCGGCGACCGC TTCCAGATCACGGGCCAGCCGACCCCGCAGGCGGCCGCCGATCTCGCACTGCTGCTGCGCGCGGGCTCGCTCGCCGCGCC GATGGACATCATCGAGGAACGCACGATCGGCCCGAGCCTCGGCGCGGACAACATCCGGATGGGCTTCCATTCGGTGATCT GGGGCTTCGTCGCGATCGCCGTGTTCATGATCGCGTACTACATGCTGTTCGGCGTCGTATCGGTGCTCGGCCTGTCGGTG AACCTGCTGCTGCTCGTCGCGGTGCTGTCGCTGATGCAGGCGACGCTCACGCTGCCCGGCATCGCGGCCATCGCGCTCGC GCTCGGCATGGCGATCGACTCGAACGTGCTGATCAACGAGCGCATCCGCGAGGAGCTGCGCCGCGGCGCATCGCCGCAGA TCGCGATCCAGGAAGGCTACGCGCACGCGTGGGCGACGATTCTCGATTCGAACGTGACGACGCTGATCGCGGGCCTCGCG CTGCTCGCCTTCGGCTCGGGCCCGGTGCGCGCGTTCGCGATCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCTCCGC GGTGTTCTTCTCGCGCGGCCTCGTGAACCTCTGGTACGGCGGGCGCAAGAAGCTGCAGTCGCTCGCGATCGGCCAGGTGT GGCGCCCCGCCGCCGAAGCCGGCACCGCGCCGCAGCTCGGCCAGGACGCGCGCGCGAACGCGCCGCAGCCCGGCGCGCGC GTCGCCGCGCCGAAGCAGCCGGCGGGCGCGCCGCGCACCGGCAAGCCGGTCGCGCGCCGCCGCTCGGGCCCGGGCGTGCC GCCCAAGCAGGGCTCGTCCAACTAA Protein sequence : MNRYPIWKYVVMVVALAIGFLYTLPNFFGEAPAVQVSSGKATVKLGADTLAQVEAALKANQVAADDVTFDNSSANATIRV RLKDTDTQLRVKDMLQKTLNADPNDPQYVVALNLQSASPRWLTALHALPMYLGLDLRGGVHFLLQVDMTGALTKKLDSDA SDARTQLRDKGIRDGGVARVDQTVVANFADQDTAEQARKLLASSVSELQWATQPGGGGYQVVGTFTPAVQKAVEEAALKQ NLTTLHNRVNELGVSEPILQQQGNDRIVVELPGVQDTAKAKDIIGRTATLEARLADPLNTHPNPNDPVPPGEELFTQGNQ APVLLKKQVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRAVSRENIGKPMAMVLFEKGKGEVLTVATIQSELGDR FQITGQPTPQAAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIRMGFHSVIWGFVAIAVFMIAYYMLFGVVSVLGLSV NLLLLVAVLSLMQATLTLPGIAAIALALGMAIDSNVLINERIREELRRGASPQIAIQEGYAHAWATILDSNVTTLIAGLA LLAFGSGPVRAFAIVHCLGILTSMFSAVFFSRGLVNLWYGGRKKLQSLAIGQVWRPAAEAGTAPQLGQDARANAPQPGAR VAAPKQPAGAPRTGKPVARRRSGPGVPPKQGSSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-90 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 43 |
