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Name : cspD (BPSS1364) Accession : YP_111374.1 Strain : Genome accession: NC_006351 Putative virulence/resistance : Unknown Product : cold shock-like protein Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 1866688 - 1866891 bp Length : 204 bp Strand : - Note : Similar to Shewanella violacea cold shock-like protein CspG SWALL:Q9S170 (EMBL:AB022716) (70 aa) fasta scores: E(): 8.6e-17, 70.76% id in 65 aa, and to Ralstonia solanacearum probable cold shock-like transcription regulator protein CspD3 or rsp0002 or rs0 DNA sequence : ATGGATACCGGTACCGTCAAGTGGTTCAACGAGACCAAGGGTTTTGGCTTCATCACGCCGGATTCGGGCGGCGACGATCT GTTCGCGCATTTCTCCGAAATCCGCAGTGAGGGATACAAGACGCTGGCCGAGAACCAGAAGGTGAGCTTCGAGACGAAGC GGGGCCCGAAAGGCCTCCAGGCTGCCAACATCAAGCCGCTGTAA Protein sequence : MDTGTVKWFNETKGFGFITPDSGGDDLFAHFSEIRSEGYKTLAENQKVSFETKRGPKGLQAANIKPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 7e-14 | 54 |
