Gene Information

Name : BPSS1496 (BPSS1496)
Accession : YP_111503.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2040815 - 2041309 bp
Length : 495 bp
Strand : +
Note : Similar to Vibrio cholerae hypothetical protein Vca0107 SWALL:Q9KN58 (EMBL:AE004353) (168 aa) fasta scores: E(): 2.3e-28, 55.9% id in 161 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1657 SWALL:Q9I368 (EMBL:AE004593) (168 aa) fasta scores: E()

DNA sequence :
ATGACAACGAACGGATCCGTCGCGCCCAAAGAGCGGGTCAACATCGTCTATCGCCCGGCGACGGGCGACGCGCAGGCGGA
GGTCGAGCTGCCGCTCAAGGTGCTCGTGCTCGGCGAGTTCTCGACGGCCGCCGACAAGCCGCCGCTCGAGGAGCTCTCGC
CCGTGAACGTCGACAAGGACGACTTCAACGACGTGATGAGGGCGCAGAACCTCCAGCTCACGCTCAGCGTGCCGAACCTG
CTGGACGATCAGGCCGGCGAGGACGACCGGCTGTCCGTCACGCTCGGCTTCGATTCGGTGCACGATTTCTCGCCCGACGC
GATCGTCGAGAAAGTGCCCGAGCTCAAGCAGCTGATCGCGCTGCGCGACGCGCTGAAAGCGCTGAAGAGCCCGATCGGCA
ACATTCCCGGCTTTCGCAGGCGCATCCAGGAGATCGTCGCCGACAAGGGCGCGCGCAAGCAGTTGCTCGACGAACTCGGC
CTCGACGAACAATGA

Protein sequence :
MTTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKDDFNDVMRAQNLQLTLSVPNL
LDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIALRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELG
LDEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 8e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSS1496 YP_111503.1 hypothetical protein VFG2474 Protein 6e-72 100
BPSS1496 YP_111503.1 hypothetical protein VFG2092 Protein 9e-41 56