Gene Information

Name : BPSS0179 (BPSS0179)
Accession : YP_110200.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 239240 - 240313 bp
Length : 1074 bp
Strand : +
Note : Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.2e-65, 56.29% id in 286 aa, and to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa

DNA sequence : 
ATGACGCAGGCGGCCGTTGCCGACACGGCGCTGTCGCCGCAAGCGCTCGCGCGGCTGCGCGCCGAACCGTGGCGCTATGG
GTTCCTCGCGCTGCTGCGCCGCATCGGCGCGGACGCGCGCATCGATCCGATCGGCAAGGCGAGGCGCCCGCAGGCGGAGC
CGTTTCGCCTCGGCCAGCAGCCGAGCCTCGCGTTCGCGCCGCGCGAGATCGCCAGCGTCGGCGACGCGAACGGGCGGCTC
AAGGTGCGGCTGTTCGGGCTCGGGATGCTGGGGCCGAACGGGCCGCTGCCGATCCACGTGACGGAGATCGCGCGCGATCG
CGAGGAGAGCCGGCGCGATCCGACGCTCGGCAATTTTCTCGATATCTTCCATCATCGCTATCTGACGCTGCTGTATCGCG
CGTGGGCGTCGGCGCAGGCGGTGGCCGGCCTCGATCGTCCGGACGACGAACGGTTTTCGTTCTACGTCGCGAGCCTCGCC
GGCCAGGATCTCGACGAGGTCGGCGCGCAGCCGCTGCCCGCGCACGCGCGGCTGTCCGCCTCGCCGCATCTGGTGCGCGA
GGCGCGCAACGCGGACGGCCTGCGAATGACGCTCGAACGTTACTTCGGCGTGCCGGTGACGCTGGAGGAAAACGTATTTC
ACTGGATCGCCGTCGATCCGCTCGAGCACAGCCGGCTCGGCCGGCCCGGCGACGCATCGACGATGGCCGCGGGCGCGCTG
CTCGGCGAGCTGGTGCCGGATCGGCAGCACAAGTTCCGGCTCGTGTTCGGGCCGCTCGACATCGACGCCTATCTGCGCTT
CACGCCGCGGGGCGAGGATCTGCCGCGGCTCGTCGAATGGGTGCGGGCGTTCGTCGGCTACGAGTTCGAGTGGGAGCTCG
AGTTGCGGATCAAGCCGAACGGCGCGCCGCCCGCCGTGATGGGCGGCCCGCATCAACTCGGCTGGTCGGGCTGGCTCGGC
CGCTCGCCGTCCGGCGAGCCGGTGACGGGCATGCGTTTCGAACCCGAGCACTATGCGCACGGGTTCGCGCGCGGCACGGC
TCGCGACACGCGCGGCATGCGAGGTGAACGATGA

Protein sequence : 
MTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFRLGQQPSLAFAPREIASVGDANGRL
KVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTLGNFLDIFHHRYLTLLYRAWASAQAVAGLDRPDDERFSFYVASLA
GQDLDEVGAQPLPAHARLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMAAGAL
LGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGPHQLGWSGWLG
RSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 1e-81 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSS0179 YP_110200.1 hypothetical protein VFG2075 Protein 2e-45 43