Gene Information

Name : BPSS2056 (BPSS2056)
Accession : YP_112058.1
Strain :
Genome accession: NC_006351
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 2787212 - 2789416 bp
Length : 2205 bp
Strand : -
Note : Similar to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 2.4e-105, 41.24% id in 725 aa, and to Yersinia pestis hypothetical protein Ypo0764 or y3430 SWALL:Q8ZHW5 (EMBL:AJ414144) (741 aa) fasta

DNA sequence :
GTGAGTCGCGTATTCACACTCGACAGCCCGCACGGCGACGGCCTGAAATTCCACACGCTCGACGGCAGCGACGAGCTTGG
CCGGCTGTTCGAATTCCGGATCGAGGCGCTCGCCGACAGTCACAGCCTGTCGCTGAAGGACCTGCTCGGCAAGCCCGTCA
CCGTCCGGATCGAACAGCAGGGCCAGTCGACGCGCTACCTGAACGGCATCGTTGCGCGCGCATCGCTTGCCGGCCGGCGT
GCCGAGCGGTACTACGGCTACGAGCTGCTCGTGCGGCCATGGCTGTGGCTCGCGACGCGTCGCTCCGATTGCCGGATATT
CCAGAACAAGACCGTGCCCGAGATCGTGCAGGAGGTGCTGTCGACGTACGGCTTTCCGATCGAGAACCACCTCGCCGAAT
CGTATGTGCCGCGCGAGTATTGCGTGCAGTACAACGGGACCGATGCCGCGTTCGTGTCGCGGCTGATGGAATTCGAGGGC
ATCTACTACTGGTTCCGGCATGCCGAGGACACGCATACGCTGATGCTGAGCGACGCGATGTCGTCGCATACGGCGCTGCC
CGGCTACGAAACGATTCCGTACATCGCGCGCGACCGCACCGTGATCGCCGACGTGGAACATATCGACGGCTGGCTGCCCG
CGCGGCAGGTGAGCGTCGGCAAGCATCAGACCACCGACTACGACTACACGAAACCACGCGCCGATCTGTCGTCGCAGAAG
GTCGATCCGCGCGGCCACGATCACGACAGCTTCGCGTCGTTCGAATGGCAGGGCGGCTATCGCGACGATGCGCCCGGCGC
GCACTACAGCCGCGTGCGGCTCGAAGAACAGCAGGCCGAGCACGAACGCGCGAGCGCCGATACGGATGTGCGCGGCGCCG
CGCCGGGGTATCTGTTCACGCTCGCGCATTGCCCGCGCGCCGACCGGAACCGCGAATACCTGATCGTGCGGTGCCAGTAC
CGTTTTCAGGAGAACGCCTATGCGAGCGATCAGGGCACGGAGGCTGTGGTGCATCAGACGATGATGCTCGTGCGGCCGTC
GAGTTTGCCTTATCGGCCGCCGCGTGAGACGCCGAGACCGCGGACCAACGAGCCGCAGACGGCGACCGTTGTCGGGCCGC
CCGGTGAGGAAATCTGGACCGATCAGTACGGGCGCGTGAAGCTGCAGTTTCGCTGGGACAGGTATGGGCAGAGCAACCAG
GATTCGTCGTGCTGGGTGCGGGTGTCGAGCCCGTGGGCCGGCGGTGGATTCGGAGGCGTGCAGATTCCGCGTGTGGGCGA
CGAGGTCGTGGTCGATTTTCTGAATGGCGATCCGGACGAGCCGATCGTGACCGGGCGGGTTTACAACGGCGAGAAGATGC
CGCCGTGGGGGCTGCCGGAGAGTGCGACGCAGAGCGGGCTGTTGTCGCGGTCGTCGCCGGGCGGGACGACCGAGCACGCG
AACGCGTTCCGGTTCGAGGACAAGAAGGGCGCGGAGCAGCTGTGGATGCATGCGGAACGGAATTTCGACGCGGAGACGGA
GGCCGATCATTCGCTTTCCATCGAGCACGACCACACGCATACGGTCGGCAACGACGAAACGATGCAGGTGAGGAACAACC
GGCAACGCAGCGTCGGGCAGGGCGAGACGGTGAACATCGGGCGGCATCGGGTCGCGCAGATCAAGGGGAATGAGACGCAG
GGGGTGGTGGGGGATCGCACGCGCACGGTCGGGAAGAAGGAGACCGTGACGATCGTGTCGGATCGCGAGGCGACGATCGG
CGGCAATCACATGGAGACGGTCGTGAAAGACAAGACCGAATCGATCGGCGAGGGCAAGACGCTGAATGTCGTCAAGCACT
ATCAGACGAATTCGAAAAGCATGAAGACGACGGTCGCTGAACATCATGTGGAGGAGATCGGTGAGCGGACGTCGACGATT
GCACACGCGCATAAGCTCACGGTCCGCGGCGAACACGCCGTCAGCGTCGGCGCAAACCACACGACGAACGTGCAGCATCA
GGTGCTCGTCAATGCCGGCGACCAGCGTGCGCTCGTGTGCGGGAAGTCGAGCGTCCTGATGAAGAGCGACGGCACGATCC
TGATCCAGGGTGTCAACGTCGAATCAAGCGGCTCCGACAGCCACAGCGTGCGCGGCAAGAAGGTCACGACATCGGCGTCG
GTCGAGCATACGGTCGAAGGGACCGTGTTGAAGCTGAATCCGTAA

Protein sequence :
MSRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQGQSTRYLNGIVARASLAGRR
AERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLSTYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEG
IYYWFRHAEDTHTLMLSDAMSSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
VDPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTLAHCPRADRNREYLIVRCQY
RFQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRPRTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ
DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHA
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQGETVNIGRHRVAQIKGNETQ
GVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTESIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTI
AHAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSAS
VEHTVEGTVLKLNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0319 NP_454896.1 Rhs-family protein Not tested SPI-6 Protein 8e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSS2056 YP_112058.1 hypothetical protein VFG2077 Protein 5e-120 42