Gene Information

Name : nfa10070 (nfa10070)
Accession : YP_117216.1
Strain : Nocardia farcinica IFM 10152
Genome accession: NC_006361
Putative virulence/resistance : Unknown
Product : oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 1111417 - 1112784 bp
Length : 1368 bp
Strand : -
Note : -

DNA sequence :
GTGGCACGGGTGGACCTGCACGACCTTGCTGCCGCGCTGTCCGACGGCGCCCTGCACACCGACCGTGACCTGCTGGAATC
CTACCGACAGGACTGGGCCAAGGATCCCGCCGCCGGCGTACCGCTGGCACTGGTCCGCGCGGCCGGGACCGCCGATGTGG
TGGCGACCCTGCGCTGGGCGAACGAGCATCGGGTGCCGGTGGTGCCGCGCGGGGCGGGCTCGGGGCTGTCCGGCGGGGCC
ACCGCCCTCGACGGCGGCATCGTGGTGAGCACCGAGCGGATGCGCGCGATCACCGTCGACCCGGTCACCCGCACCGCCGT
GGTGCAGCCCGGGCTGCTCAACGCCGAGGTCAAGCGCGCCGTCGCCGAGTACGGCCTGTGGTATCCGCCGGACCCGTCCT
CGTTCGAGATGTGTTCGATCGGCGGCAACGCGGCGACCAACGCGGGCGGGCTGTGCTGCGTGAAGTACGGCGTCACCACC
GACTACGTCCTCGGCATGGAAGTGGTGCTGGCCGACGGCACCCCGGTGCGCCTCGGCGGGCCACGCCTGAAGGACTCCGC
GGGCTTGTCGCTGACCAAGCTGTTCGTGGGCAGCGAGGGCACGCTCGGCATCATCACCGAACTCACCCTGCGCCTGTTGC
CCGCCCAGCCGCGGCAGAGCACCGTCGTGGCGAGCTTCGCCGACCTGTCCGCCGCCACCGAGGCCATCCTCGCCATCACC
GCCGCGCTCCGGCCCTCCATGCTCGAGTTCATGGACAGCGTGGCGATCAACGCCGTCGAGGACGAATTGCGCATGGGATT
GGACCGCTCGGCCGCCGCGCTGCTGGTCGCACGCTCCGACGCGCCGGGCGAGTTCGCCGCGCGGGAGGCCGAGCTGATGG
CCGAGGCATGCGAGAAGTCCGGCGCCACCGAGGTTTTCCATACCGAGGACGCGCAGGAGGGCGAGGCGTTCACCGCGGCG
CGGCGATTCGCCATCCCGGCGGTGGAGCGGCTCGGGCCGCTGCTGCTCGAGGACGTCGGGGTGCCGCTGCCGCGGCTCGG
CGAGCTCGTCACCGGGATCGCCGAGATCGCCCGGCGCAACGAGGTCACCGTCTCGGTGATCGCGCACGCGGGCGACGGCA
ACACCCACCCGCTGATCGTGCACGACCCCACCGACGCCGACAACACCGCCCGCGCGCACCGCGCCTTCGGCGAGATCATG
GAGCTGGCGATCGCCCTGGGCGGCACCATCACCGGCGAACACGGTGTCGGACGCTTGAAGAAGGCGTGGCTGCCCGATCA
GCTCGGGCCGGACGTGATCGCGCTGACCAAGCGCATCAAGGACGCCCTCGACCCACACGGCATCCTCAACCCCGGCGCCA
TCCTCTGA

Protein sequence :
MARVDLHDLAAALSDGALHTDRDLLESYRQDWAKDPAAGVPLALVRAAGTADVVATLRWANEHRVPVVPRGAGSGLSGGA
TALDGGIVVSTERMRAITVDPVTRTAVVQPGLLNAEVKRAVAEYGLWYPPDPSSFEMCSIGGNAATNAGGLCCVKYGVTT
DYVLGMEVVLADGTPVRLGGPRLKDSAGLSLTKLFVGSEGTLGIITELTLRLLPAQPRQSTVVASFADLSAATEAILAIT
AALRPSMLEFMDSVAINAVEDELRMGLDRSAAALLVARSDAPGEFAAREAELMAEACEKSGATEVFHTEDAQEGEAFTAA
RRFAIPAVERLGPLLLEDVGVPLPRLGELVTGIAEIARRNEVTVSVIAHAGDGNTHPLIVHDPTDADNTARAHRAFGEIM
ELAIALGGTITGEHGVGRLKKAWLPDQLGPDVIALTKRIKDALDPHGILNPGAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 2e-46 41