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Name : nfa32310 (nfa32310) Accession : YP_119442.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3434096 - 3435493 bp Length : 1398 bp Strand : + Note : - DNA sequence : ATGAGCACTGACGCTCTCGGGATGCGAGGTCCCGTCCACGGCACGAAGGACGCCAAGCGCGTCGCGATCGGCTCCTCGGT CGGCGCCGTCATCGAGACGTATGACTTCATCGGCTTCGGTACCGCCGCGGCGCTGTACTTCGGCACCGCCTTCTTTCCCG GCGAGGACCCGGTGATCGGCACGCTGGCCGCGTTCGCGACCCTCGGTGTGGGCTTCGCGGCCCGGCCACTGGGCGGCATT CTCGGCGGTCATCTGGGTGACCGGGTGGGCCGCAAGCCGGTGCTGGTCGCCTCGCTGATCGTCATGGGCCTGGCGACCTT CGCCATCGGCCTGCTGCCCACCTACGCCGCCGTCGGACTGTGGGCGCCCGCGCTGCTGGTGACCGTGCGGATCATCCAGG GCCTTGCCTTCGGCGCCGAGTGGGGCGGCGCCATCCTGATGAGTTACGAGCACGCGCCGTGGCGGGCCAAGGGCCGCTAC ACCGGCATCGTGCAGGCCGGCTTCCCGGTGGGCCTGCTGCTGGCGAACCTGGTGTTCCTGGTGAGCGTGCACCTGGGCGG TGACTGGGCCTGGCGCGTGCCGTTCCTGGCCAGCATCGTGCTGGTGGCAGTCGGTCTGGTGATCCGCTCCAAGGTGCCGG AGTCGCCGGTCTTCGAGGACGTCAAGGACAGCGGCGAGATCGCCGCGTCCCCGGTACTGGACTCGGTGAAGAAGGACTGG CGCGACCTGCTGCGCGGCATCGGCCTGCGCGTGGCGGAGACCGCCGGTTATGCCGTCTCGATCACCTACATGATCTCCTA TTTGCACGACAACGAACTGGCGGGCAAGTCCGAGACCCTGCTGGCGCTGTGCGTGGCCTCCGCAGTCGGCATCCTCGCCA CCGTCGCCTGGGCCGCCCTCACCGACCGGATCGGGCGCAGACCGGTGTACCTGGGGGTGTGCGGGTTCGCGGTGCTGTTC GGCGTCCCGATGTTCCTGCTCGTCAATACCGGCATGTTCGTCCTGGTCCTTGCGACCTTCGTCATCGCCTACGCGGTCTG CCAGAACGCGCTGGCCGGCGCGCAGGGCGCGTGGTTCCCGGAGCTGTTCCAGGCCGCTCGCCGTGCCTCCGGCGCCTCGC TGGCCTATCAGATCTCGGCCATGGTCTCCGGTTTCACCCCGTTCGCCACCACACTGCTGTTCGTCTGGCTCGGCTGGCTC GGCCCGGCCCTGCTGTTCAGCGGCTACGGCCTGATCGGCCTCATCGCCGCCCTGCTCACCCGCGAGACCTGGGGTCCGCA CGAACGCGCCCTCGCGGCCGCCGCGACCCGCGCCGCCACCTCGTCCTCCGCCCCCGGCGCAGCGCAGCGCCACCTCGACA CTCCGACTCCGACCCTCAGGGAAAAGGAACTGCTGTGA Protein sequence : MSTDALGMRGPVHGTKDAKRVAIGSSVGAVIETYDFIGFGTAAALYFGTAFFPGEDPVIGTLAAFATLGVGFAARPLGGI LGGHLGDRVGRKPVLVASLIVMGLATFAIGLLPTYAAVGLWAPALLVTVRIIQGLAFGAEWGGAILMSYEHAPWRAKGRY TGIVQAGFPVGLLLANLVFLVSVHLGGDWAWRVPFLASIVLVAVGLVIRSKVPESPVFEDVKDSGEIAASPVLDSVKKDW RDLLRGIGLRVAETAGYAVSITYMISYLHDNELAGKSETLLALCVASAVGILATVAWAALTDRIGRRPVYLGVCGFAVLF GVPMFLLVNTGMFVLVLATFVIAYAVCQNALAGAQGAWFPELFQAARRASGASLAYQISAMVSGFTPFATTLLFVWLGWL GPALLFSGYGLIGLIAALLTRETWGPHERALAAAATRAATSSSAPGAAQRHLDTPTPTLREKELL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-53 | 41 |
