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Name : nfa33530 (nfa33530) Accession : YP_119564.1 Strain : Nocardia farcinica IFM 10152 Genome accession: NC_006361 Putative virulence/resistance : Unknown Product : transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3553814 - 3555208 bp Length : 1395 bp Strand : + Note : - DNA sequence : ATGAGCCGGTCGTCTTCCCGGCGAGGAACGGAGGCCCCCATGAATCCGGCAGTGACGCCGCATTCCGATCCGGCGCTGCG GCGCCGCGTCGCCGTGTCGAGCTTGCTCGGCACGGCGATCGAGTACTACGACTTCCTGCTCTACAGCACCATGACGGCGC TGGTGTTCAACAAGGTCTTCTTCCCCGACTCGAACCCGGCGCTCGGCACCATCGCGGCCTTCGGCACGCTGGCCGCCGGA TATGTCGCACGGCCGATCGGCGGTGTGCTGTTCGGCCACTTCGGCGACCGCATCGGGCGCAAATCGATGCTCGTGCTGAC CATGCTGCTGATGGGCGCGTCGAGCTTCCTGATCGGTGTGCTGCCCACCTACGCCGGTGTCGGCATCCTCGCGCCGCTGC TGCTGGTGTTGCTGCGCGTGGTGCAGGGCGTGGCGATCGGCGGCGAGTGGGGCGGGGCCACGCTCATGGTCACCGAACAC GCCGAACCGGGTCGTCGCGGTTTCTGGAACGGCATCATGCAGATGGGATCGCCGATCGGCTCGCTGCTGTCGACCGGTGT GGTGGCCGTGGTCGCGCTGCTGCCCGAGGAAGACCTGTTGTCGTGGGGCTGGCGGATCCCGTTCCTGGCCAGCATCGTGC TCCTCGCCGCCGGGGTGTACCTGCGGATCGGGGTCACCGAGTCGCCGGTGTTCCAGGCCGCGGCGGCCGAGGCCGAGCCG GCGCCGCGGATTCCGTTCGTGGCCATCCTGCAACGTCCGGCCACCCTGCTGCTGGCCTGCGGCATCGGGATAGGCCCGTT CGCGTTGACCGCGTTGCTGAGCACCTACATGATCAGCTACGCCACCAATATCGGCTACGACCGCTCCAGCACGGTGAACG GCCTGTTGTTCGTCTCCACCACGGCGTTCATCGCCATCCCGCTGTTCTCTGCCCTGTCGGATCGGGTGGGCCGTCGGCCG GTCGTGCTGGGCGGCGCGATCGGCATCGTGATCCTGGCCTGGCCGATCTACACCATGGTCGACTCGGGTTCGGTGCCGCT GTTGTTCGCCGCCATGGTGCTCGGCCAGTGTGCCCAGTCGGCCATGTTCGCGCCGCTGGGCGCACTGCTCTCGGAGATGT TCGGCACCGCGGTCCGCTACACCGGTGCCTCGATGGGCTACCAGTTCGCGGCGCTGCTCGGCGGCGGCTTCACACCCCTG GTGGCCAGCGCGCTGCTGGTCGGCGGACCGGACAGCACCCCGCTGATCCTGCTGGCCGTCGGTTGTGGTCTGGTGACGGT GTTGTGCATCTCGCGCGTGCGGGAGACCCGCGGTGCGGATCTGCACAGCGCTGTCACCGGTGCGGCGGTCGACACCGCCC GGCCGGTTCCGTCGGCCGAGGGTTCCGGTCACTGA Protein sequence : MSRSSSRRGTEAPMNPAVTPHSDPALRRRVAVSSLLGTAIEYYDFLLYSTMTALVFNKVFFPDSNPALGTIAAFGTLAAG YVARPIGGVLFGHFGDRIGRKSMLVLTMLLMGASSFLIGVLPTYAGVGILAPLLLVLLRVVQGVAIGGEWGGATLMVTEH AEPGRRGFWNGIMQMGSPIGSLLSTGVVAVVALLPEEDLLSWGWRIPFLASIVLLAAGVYLRIGVTESPVFQAAAAEAEP APRIPFVAILQRPATLLLACGIGIGPFALTALLSTYMISYATNIGYDRSSTVNGLLFVSTTAFIAIPLFSALSDRVGRRP VVLGGAIGIVILAWPIYTMVDSGSVPLLFAAMVLGQCAQSAMFAPLGALLSEMFGTAVRYTGASMGYQFAALLGGGFTPL VASALLVGGPDSTPLILLAVGCGLVTVLCISRVRETRGADLHSAVTGAAVDTARPVPSAEGSGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 1e-60 | 43 |
