|
Name : secD (lpl1977) Accession : YP_127313.1 Strain : Legionella pneumophila Lens Genome accession: NC_006369 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2217639 - 2219495 bp Length : 1857 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCAAAATAAATATCCTCTATGGAAAAATCTAATGCTGATAGTGATTGCAGTCATTGGATTTGTTTACGCTATACCGAA TTTGTATACGGAAAATCCCGTTGTTCAAATTTCTGCGGGTACAGATGAAGACACAGAGACAATAAAAAATCAGGTAGAGT CCATATTAAAAAATGCCAATATGGATTATAAATCTCTGGTTGTGGAGAGGGATGGGGTAGAGGTAGTATTTTCTTCTACT GATTCTCAATTATTAGCTCGTGATGTTATCAAGAATAGCCTGGGATCTGATTACACAGTGGCTTTGAATTTAGCGCCTTC CACACCAGCTTGGCTTGAAGCAATTCATGCTGACCCCATGAAGCAAGGGTTGGACTTAAGAGGCGGTGTTCATTTTCTTC TTGAAGTGGATGTCGAGAGTGTTATAAGTCGGCGTTATGAAGGAATAATGAAAAATATTGGCCAAGAATTACGTGAAGCA GGTATTCGTTATTCAGGCATACGTTATTTATCAGATAAAGGGATTGAATTGCGTTTCAGAGATTCTGACTCAATGGAAAA TGCTTTAGTTGAGTTAAGACAAAAAATATCTGATGTGGTTTTTGTTAAAACTAAAACACAAAATTCAATTTTAGGCGCCA TTTCTCCAGCAGAATTAAATTCCATAAGACAAAATACTATTGAGCAGACAATGAGTATCTTGAGAAATCGTGTCAACGAG CTCGGAGTTGGTGAAGCTGTCGTACAACAACAAGGGGCGACTCGAGTCGCCGTTGATTTGCCAGGCATTCAAGACGCAGC CAGAGCAAAACAAATACTTGGTGGTACTGCTACTTTGGAATTTCATTTGGTTGATCAGGAAAATGACCCTTTCATTGCAA AGCAAACCGGCGTAGTTCCTGTCAATGATAAGCTGTATATGATGGATGGTCATCCTATCTTATTAAAGAGACAGGTTGTT TTAAGTGGTGACTCTATTACGTCAGCAGTATCCAGTTTTGATCAACAAACGGCTTCTCCATCTGTTCAAATTCAATTGGG TGGTGGGGGCGAGAGCTTGTTTACTAAAGTTACGCGTGAAAATATCGGTAAGCGCATGGCGATCGTTTTTGTGGAAACCA AAACGACTACACAAACAATTAATGGCGAGGAAAAACGAGTAACAAAGAAAGAAGAGCGAGTTATTAGTGCGCCAGTGATT CAAAATGCTTTAGGCAGTAATTTCCAGATTACCGGACTGACTGATAGTAAAGAAGCGAGTAATCTGGCTTTATTATTAAG AGCTGGTGCTTTACCCGCTGCAATTTATCCTGTTGAAGAGCGTACCGTTGGCCCAACTCTTGGAAAGGAAAATATTCGCC GAGGACTTATTTCCCTGGAAGTTGGTATGGGTTTAATTTTGGCACTAATGCTCGTGTATTATCATTTTTTTGGTTTAATT GCTGATATTGCATTGATGCTGAATTTAGTTTTTCTTTGCGCATTGTTATCCATAATTGATGCGACTCTGACTTTACCGGG AATTGCGGGGATTGTTTTGACCGTGGGCATGGCTGTTGATGCCAATGTCCTGATTTATGAGCGGATTAGAGAGGAGTTGC GCAATGGACTGTCTCCTCAAGCTGCTATTCATGCAGGATATGAGCGAGCATTTTCAACTATATTGGATGCCAACGTGACT ACTTTAATTGTAGCTATCATTTTATTCGCGGTGGGCACAGGACCGGTGCGCGGGTTTGCGGTTGTCCTTTCTCTAGGTTT GTTAACTTCTATGTTAACTGGTATTACTTACACCAGGGCTATTGTGAATTGGTATTATGGTGGACGTAATGTCAAAAAAT TATCTATAGGCATATAA Protein sequence : MQNKYPLWKNLMLIVIAVIGFVYAIPNLYTENPVVQISAGTDEDTETIKNQVESILKNANMDYKSLVVERDGVEVVFSST DSQLLARDVIKNSLGSDYTVALNLAPSTPAWLEAIHADPMKQGLDLRGGVHFLLEVDVESVISRRYEGIMKNIGQELREA GIRYSGIRYLSDKGIELRFRDSDSMENALVELRQKISDVVFVKTKTQNSILGAISPAELNSIRQNTIEQTMSILRNRVNE LGVGEAVVQQQGATRVAVDLPGIQDAARAKQILGGTATLEFHLVDQENDPFIAKQTGVVPVNDKLYMMDGHPILLKRQVV LSGDSITSAVSSFDQQTASPSVQIQLGGGGESLFTKVTRENIGKRMAIVFVETKTTTQTINGEEKRVTKKEERVISAPVI QNALGSNFQITGLTDSKEASNLALLLRAGALPAAIYPVEERTVGPTLGKENIRRGLISLEVGMGLILALMLVYYHFFGLI ADIALMLNLVFLCALLSIIDATLTLPGIAGIVLTVGMAVDANVLIYERIREELRNGLSPQAAIHAGYERAFSTILDANVT TLIVAIILFAVGTGPVRGFAVVLSLGLLTSMLTGITYTRAIVNWYYGGRNVKKLSIGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-111 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-111 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-111 | 47 |
