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Name : secD (PBPRA0745) Accession : YP_128960.1 Strain : Genome accession: NC_006370 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 825371 - 827224 bp Length : 1854 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGTTAAACCGTTATCCCTTGTGGAAGAATCTGATGGTGGTGTTAGCACTGCTTGTCGGTCTGCTTTATGCGCTTCCCAA TGTTTACGGTGAAGATCCAGCGATTCAAATCACCGGGGCGCGTGGCGCCTCGGTTGATATGTCTACTCTGGATACTGTCA CCGAAGATTTAAAAAAGAACAACATCTCCTATAAATCTGTCGCTTTCGAAAACGGTACTGTACTTGTCCGCTTTAACGAC ACTGATACTCAGATCAGTGCTCGCGATATCATCAATGAACAGCTAGGCGACGATTTCGTCGTTGCGCTTAATCTAGCAGC ATTAACGCCTGACTGGCTTGAATCTATTGGTGCCTCACCAATGAAGCTGGGTCTTGATTTACGTGGTGGTGTTCACTTCT TAATGGAAGTGGATATGGATGCGGCAATGGAAAAGTTACTTGGTCAACAAGAAGAGACTTTCCGTACCGAATTACGTGAA GCTAAAGTGCGTTACCGTGCGATAAGCAAAACAGATTCCTCTGTCGCAGTGCGTCTGCGTAATGATGAAGATCTAAAAGC AGCAGAAACGGCACTCGCGCAATTACACCCTGATATGCTATTTACCGATAGTAATAGCAATGGGCGTTTCGTTCTTACTG CACAATTTACAGAAGCTCGTCTGAAAGAAATTCGTAACTACGCAGTTGAACAGAACATCACGATTCTTCGAAATCGTGTG AATGAACTGGGTGTTGCTGAACCTTTAGTGCAACGTCAAGGTGCTAACCGTATTGTGGTTGAGCTTCCTGGTGTTCAAGA TACTGCTCGCGCAAAAGAAATTCTTGGTGCGACGGCAACACTTGAATTCCGTGAAGTCGATAGCACGGCAGATCTTGCTG CGGCTGCCGCTGGTCGAGTACCAGCAGGTAGTGAAGTGAAGTACACCCGTGACAAGCGTCCGGCGGTATTAAAGAAGCGT ATCATCCTTGCGGGTTCTCATATCACTGATGCGAGCTCAAGTGCTGATGAATATGGCCGTCCTCAAGTTAACATCTCGCT AGACAGCGAAGGTGGTAGCAAGATGACAGCGTTCTCACGTAATAATGTGGGCAAGCTGATGGCGACAGTGTTTACCGAGT ATAAAGATAGCGGTAAACGTCAAGCCGACGGTAAAGTGATTCTTCAAAAGCATGAAGAAGTGATAAACCAAGCGACGATT CAAACTGCGTTAGGTCGTAATTTCCGTATTACCGGAATCGATTCGCAGGCAGAAGCACATAACTTAGCGCTTCTACTTCG TGCTGGTGCGCTGATTGCGCCTATCTCTATTGTTGAAGAGCGTACGATTGGTCCATCAATGGGTCAGCAGAATATCGATA TGGGTATTCAGGCGATGATTTGGGGCATGGTAGCAGTAATGCTCTTTACCTTAATTTATTACCGTGGTTTTGGCCTAATT GCCAACATGGCACTCGTTATGAACTTGGTATTGATTATCGGTGTTATGTCGATGATTCCAGGCGCGACGATGACCTTACC TGGTATCGCAGGTATCGTATTAACAGTCGGTATGGCTGTCGATGCGAACGTATTGATATTTGAACGTATCCGTGAAGAAT TGCGTGAAGGCCGAAGCCCTCAACAAGCGATTCAGCAAGGTTACGCGAATGCATTCAGTACGATTGCCGATGCAAACATT ACGACACTTATCACAGCAATTATTTTGTTTGCTGTTGGTACTGGTGCTATCAAAGGCTTCGCTGTAACACTATCAATCGG TATCCTGACTTCAATGTTCACGGCGATTATAGGTACACGTGCGGTTGTTAACTTTGTCTACGGCGGTAAGCGCGTAGATA AACTGTCGATATAG Protein sequence : MLNRYPLWKNLMVVLALLVGLLYALPNVYGEDPAIQITGARGASVDMSTLDTVTEDLKKNNISYKSVAFENGTVLVRFND TDTQISARDIINEQLGDDFVVALNLAALTPDWLESIGASPMKLGLDLRGGVHFLMEVDMDAAMEKLLGQQEETFRTELRE AKVRYRAISKTDSSVAVRLRNDEDLKAAETALAQLHPDMLFTDSNSNGRFVLTAQFTEARLKEIRNYAVEQNITILRNRV NELGVAEPLVQRQGANRIVVELPGVQDTARAKEILGATATLEFREVDSTADLAAAAAGRVPAGSEVKYTRDKRPAVLKKR IILAGSHITDASSSADEYGRPQVNISLDSEGGSKMTAFSRNNVGKLMATVFTEYKDSGKRQADGKVILQKHEEVINQATI QTALGRNFRITGIDSQAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQAMIWGMVAVMLFTLIYYRGFGLI ANMALVMNLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELREGRSPQQAIQQGYANAFSTIADANI TTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIIGTRAVVNFVYGGKRVDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 50 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 50 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 50 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 50 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 50 |
