Gene Information

Name : pipB (SPA1762)
Accession : YP_150992.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1357
EC number : -
Position : 1821000 - 1821875 bp
Length : 876 bp
Strand : +
Note : similar to Salmonella typhi CT18 conserved hypothetical protein

DNA sequence : 
ATGCCAATAACTAACGCGTCCCCAGAAAATATATTAAGATATTTGCATGCGGCCGGTACCGGTACGAAAGAAGCAATGAA
AAGTGCAACTTCACCACGCGGTATACTGGAATGGTTTGTCAATTTTTTTACCTGTGGTGGAGTAAGAAGAAGCAATGAAA
GATGCTTTCAGGAGGTAATTGGAAAACTGACCACATCATTATTATATGTAAATAAAGATGCTTTCTTCGATGGTAATAAA
ATATTTCTGGAGGATGTCAACGGGTGTACTATATGTCTGTCATGTGGAGCAGCATCCGAAAATACGGATCCCATGGTCAT
TATTGAAGTGAACAAAAATGGAAAAACTGTAACGGATAACGTTGATAGTGAGAGATTTTGGAATGTATGTCGAATGTTAA
AGCTGATGAGTAAACATAATATACAACAGCCTGATTCACTTATAACCGAGGATGGTTTTCTGAACCTGCGCGGAGTAAAC
CTGGCTCATAAAGATTTCCAGGGGGAAGATTTGTCAAAAATAGATGCTTCTAATGCAGATTTCCGTGAAACAACTCTTTC
TAATGTAAATTTAGTCGGTGCAAATTTGTGTTGTGCAAATCTACACGCTGTAAATCTAATGGGTTCAAACATGACTAAAG
CAAACCTGACTCACGCAGACCTGACTTGCGCTAACATGTCCGGTGTAAACTTAACCGCTGCAATTCTATTCGGCTCAGAC
TTAACTGACACCAAACTAAATGGTGCAAAATTAGATAAGATAGTTCTAACTTTAGCAAAAGCATTAACAGGAGCCGATCT
GACAGGTAGTCAACATACCCCTACTCCACTCCCGGATTACAATGATAAAACGCTTTTCCCCCATCCAATATTTTAG

Protein sequence : 
MPITNASPENILRYLHAAGTGTKEAMKSATSPRGILEWFVNFFTCGGVRRSNERCFQEVIGKLTTSLLYVNKDAFFDGNK
IFLEDVNGCTICLSCGAASENTDPMVIIEVNKNGKTVTDNVDSERFWNVCRMLKLMSKHNIQQPDSLITEDGFLNLRGVN
LAHKDFQGEDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSD
LTDTKLNGAKLDKIVLTLAKALTGADLTGSQHTPTPLPDYNDKTLFPHPIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipB NP_460061.1 secreted effector protein Virulence SPI-5 Protein 1e-129 98
pipB NP_455586.1 conserved hypothetical protein Virulence SPI-5 Protein 1e-129 98
pipB YP_216027.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 1e-128 97
pipB AAC33725.1 PipB Virulence SPI-5 Protein 3e-129 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipB YP_150992.1 hypothetical protein VFG0589 Protein 6e-130 98