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Name : secD (SPA2316) Accession : YP_151513.3 Strain : Salmonella enterica ATCC 9150 Genome accession: NC_006511 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2408869 - 2410683 bp Length : 1815 bp Strand : - Note : similar to Salmonella typhi CT18 protein-export membrane protein SecD DNA sequence : ATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAACCTGTATGGTGAGGATCCGGCTGTTCAAATCAC TGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATTCCCGCTA AGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACCACCGATACCCAGCTACGCGCCCGTGAAGCGCTG ATGAGCGTGCTGGGGGATAAATATGTCGTAGCGCTTAACCTTGCGCCGGCTACGCCGCGCTGGTTGGCGGCTATTCACGC CGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGATACCGCGTTAGGTA AACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAAAAAGGCATTCCTTATACCACCGTTCGTAAAGAA AATAATTATGGGTTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGATGAGGCGATCGCCTATCTGACGCCGCGTCATCG TGACCTGGTGATTTCCAGCCAGAGCGGTAATCAACTTCGCGCGGTAATGACCGATGCGCGCCTGAGCGAAGCGCGTGAAT ACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAACTGGGCGTCGCGGAGCCTGTCGTACAACGCCAG GGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGCTCGCGCGAAAGAAATTCTCGGTGCGACCGCGAC GCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCTGCTGCCGGGCGCGTACCGGGCGATTCCGAAGTGA AACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATCCTCACGGGCGACCATATCACCGACTCGACGTCC AGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAGCGCAGGCGGCAATATCATGTCTAACTTCACTAA GGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAGACAGCGGTAAGAAAGACGCTAACGGTCGCGCCG TACTGGTGAAACAGGAAGAGGTGATTAACATTGCCAACATCCAGTCCCGGCTGGGTAACAGCTTCCGTATTACCGGTATC AGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGCTGCTGCGTGCGGGCGCCCTGATTGCGCCGATTCAGATCGTTGAAGA GCGCACCATTGGCCCGACTTTGGGTATGCAAAATATTAAGCAGGGCCTGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCA TCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGCGCGTTAGTGGCTAACCTGGTGTTGATTGTC GGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGATTGCGGGTATCGTGTTAACCCTTGCGGTGGCGGT CGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTAATGGCCGCACGGTACAGCAGGCGATAAACGAAG GCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACGCTGATTAAAGTCATCATTCTGTATGCTGTCGGT ACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTATCGGTACGCG TGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGTCAATCTGA Protein sequence : MLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREAL MSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKE NNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTS SQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGI SNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-117 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-117 | 47 |
