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Name : tcfC (SPA2453) Accession : YP_151644.1 Strain : Salmonella enterica ATCC 9150 Genome accession: NC_006511 Putative virulence/resistance : Unknown Product : outermembrane fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2549942 - 2552629 bp Length : 2688 bp Strand : - Note : - DNA sequence : GTGAGTCGTTATTTCTGGATGTATTATTTACTGGGATTGTGCAGTTTTACCAGCCAGGCAACTCTTATTCCCCCTCCTGG ATTTGAATCTCTGCTGGAAGGACAGACTGAGCAAATTGAAGTGTTGCTACCAGGGCATTCACTGGGATTATTTCCGGTGG TGGTTAAACCGGACACCGTGCAGTTCATGTCCCCATTGATGGTACTTGAAAGCAGTGGGCTTGCCGCGTTGCCGGCCGCA GAACGGCAAAAAGCGCTGGCTGCACTCAGCCGTCCGTTGCTACGTAACAGCAATCTGGTCTGTGGTGTCTCAGAAGCAAA AGACAGCAGCGAGTGTGGTTACGTGGCAACAGATAAAGAGGATGTTGCGGTTATTTTTGATGAGAACAACGCTCAGTTAT CTTTGTTTCTTAACCGGGACTGGTTGCCGGATGAAGAACGACGTGATAAACGCTGGCTGACTCCGACCCCGGAGGGTGTC AGCGCATTTATTCACCGCCAGACGCTGTATCTGAGTGATGATCTCCACAGTCGTAATATGACACTGAATGGTAGCGGTGC CCTGGGGCTTGGTGACGGTCGTTATCTGGGAGGCAACTGGGCGGCTATCTGGAATCAGTCAGAACATTACAATAACAGTC AGGCCTGGTTTGACAATCTGTTTGTCCGTCAGGATCTCGGCAATCAGTATTATCTCCAGGCTGGTCGGATGGATCAGCGG AATCTGTCCAGCGCCACGGGGGGGGATTTTGGGTTCAGTCTGCTTCCCCTGAGCCGGTTTGATGGATTACGAACCGGGAC CACCCAAGCTTATGTTAACCATGAGGTGGACCAGAATGCCACTCCGGTTATGGTTCAGGTTACCCGAAATGCCCGTATTG ATATTTATCGTGGCAGCGAGTTGCTGGGGAGTCAGTTCCTGACCCCGGGAATGCATACCCTGGATACTCATTCTCTTCCA CCGGGAAGCTATCCTCTGGCGTTGCGGGTGTATGAGGATGGGATTCTGCGGCGAACGGAGACCCAGCCCTTCAGTAAGGG GGGCAATCGCTTCAGTGCACAGACCCAGTGGTTTATTCAGGGCGGGCTGGAAGATACCGGGGATAAAGCCAGCCATTATG ACGGTGAGACTGTCATGGCTGCCGGATTCCAAACTGGGCTGCGGAAAAATATCAGTCTGACCGAAGGTATCTCTCTGGCA CATGAGGCCTGGTACAGTGAAACCCGACTGAATTCACAGCATGCAGTGCTGGATGGCACGCTGGACCTTTCTGCCGGGAT ACTGCATGGGACAGACAGCACGAGCGGTAACACTGAGCAGGTGACATACAACGACGGATTTTCCGCGAGTCTGTGGCGTA ACCATACGGAAAGTGATGCCTGTAGTGGTCGTCATCCACAGTCAGTGCATGCCAGTATGACCTGCCAGACTTCGATGAAC GCCTCCCTGTCGGTTCCGGTGGGGAACTGGTATGCCCTACTGGGATACAGTACCAGCAGGACAGAAGGTCGGCCGGTTTA CCGGGGATATGATGATAACAGTGACAAAGAAAATGTGTTCTGGCGACAGGCATACATCCCTGCCTCTCACCGCGAATCTG CTCAGGCTAGTGCAACGTACAGCCTTAATATGGCTGGCATGAATATTAATACCCATGGGGGAGTATGGCGAACCCGAAAT GACGGAGTGAATGATGATGGCTTGTTTATGAGTGTCAGTGTGTCATATGCCTCTCAACCACCGACAATGACTGGCAGTAA TGGGTATACCTCAGCCGGGACCGATATTCACAATAGCCGGAATCAAAAAACACAGACGTCCTGGAATGTGAACCATGTGA GATCCTGGCAGCAGGATCTGTATCGTGAACTGTCGGTGGGTTTCTCCGGTTATAACGACGACAGCTGGAGCGGGAGTCTC GGCGGACGCATGAGCGGCCGTATGGGTGAACTGAGCGCCACTATCAGTAACTCCCATCAACGTAATGCGGGCAGCGCCAG TTCACTCACCGCTGGCTACAGCTCGTCTCTGGCGTTATCCCGTAATGGACTGTTCTGGGGAGGTGGTCAGGACGGTGAAC CGGCCTCTGGCATGGCGGTGAACGTGGAGTCAGAGGGGGACGAGGGCAGTAGCGGGAAAGTAGTCAGCGTTCGTGGCAGC AGCCAGCCGTTCAGTCTCGGTTTTGGTCAGCAGTCGCTGTTGCTGATGGAAGGCTATAACGCCACGGAGGTGACCATTGA GGATGCAGGGGTTAGTTCACAGGGTATGGCAGGCGTAAAAGCGGGAGGGGGAAGCAGGTGTTACTTCCTGACACCCGGGC ATCTGCTGGTTCACAACATCAGCGCCAGTATGAGCCGACTGTACGTTGGCCGCGTACTGGACAAGGATGGCAGACCGCTG CTGGACGCACAGCCACTGAACTATCCATTTTTGTCGTTGGGACCTTCCGGGCGATTTAGCCTGCAGAGCGAGCATAAAGA ATCCAGCCTGTGGCTGCTGTCTAAAAACAGGATCCTGCGTTGTCCGATGTCAGTACATAAACGTCGGGATGTTATGCAGG TAGTGGGTGATGTGCGGTGTGAATTAAGTGACGTGGATGCCCTGCCACAGGCGTTGCAAATATCGCCGCGGGTCATCCGT TTGCTGAACGTGGCAGGTTTGCTGCGCCATTCCGTTCAGGAAGCCTGA Protein sequence : MSRYFWMYYLLGLCSFTSQATLIPPPGFESLLEGQTEQIEVLLPGHSLGLFPVVVKPDTVQFMSPLMVLESSGLAALPAA ERQKALAALSRPLLRNSNLVCGVSEAKDSSECGYVATDKEDVAVIFDENNAQLSLFLNRDWLPDEERRDKRWLTPTPEGV SAFIHRQTLYLSDDLHSRNMTLNGSGALGLGDGRYLGGNWAAIWNQSEHYNNSQAWFDNLFVRQDLGNQYYLQAGRMDQR NLSSATGGDFGFSLLPLSRFDGLRTGTTQAYVNHEVDQNATPVMVQVTRNARIDIYRGSELLGSQFLTPGMHTLDTHSLP PGSYPLALRVYEDGILRRTETQPFSKGGNRFSAQTQWFIQGGLEDTGDKASHYDGETVMAAGFQTGLRKNISLTEGISLA HEAWYSETRLNSQHAVLDGTLDLSAGILHGTDSTSGNTEQVTYNDGFSASLWRNHTESDACSGRHPQSVHASMTCQTSMN ASLSVPVGNWYALLGYSTSRTEGRPVYRGYDDNSDKENVFWRQAYIPASHRESAQASATYSLNMAGMNINTHGGVWRTRN DGVNDDGLFMSVSVSYASQPPTMTGSNGYTSAGTDIHNSRNQKTQTSWNVNHVRSWQQDLYRELSVGFSGYNDDSWSGSL GGRMSGRMGELSATISNSHQRNAGSASSLTAGYSSSLALSRNGLFWGGGQDGEPASGMAVNVESEGDEGSSGKVVSVRGS SQPFSLGFGQQSLLLMEGYNATEVTIEDAGVSSQGMAGVKAGGGSRCYFLTPGHLLVHNISASMSRLYVGRVLDKDGRPL LDAQPLNYPFLSLGPSGRFSLQSEHKESSLWLLSKNRILRCPMSVHKRRDVMQVVGDVRCELSDVDALPQALQISPRVIR LLNVAGLLRHSVQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tsaC | NP_454914.1 | outer membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 99 |
