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Name : ccmF (IL1101) Accession : YP_155490.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Unknown Product : cytochrome c biogenesis factor Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1184170 - 1186125 bp Length : 1956 bp Strand : - Note : - DNA sequence : ATGATTGCTGAAGCAGGACATCTTGCCATAGCGATTGCGCTGGCCTTTTCTGTATTACTGGCGGTTTATCCTTTATGGGG AGCGGCGAAAGGAAACGGCGGCATGATGGCTTTAGCCCGGCCGTTTGCCTATGGCCAGTTTTTCTTTACCGCTATCGCTT TTGCTTTATTAGTCTGGGGCTTTGTCAGTAACGACTTTAGTATTGCTTATGTTGCGGCAAACTCGAATAGTCAGCTACCG GTTGCGTATCGGGTTACCGCGGTGTGGGGGTCACATGAGGGCTCTTTTCTTCTCTGGATGCTAATGCAGGCAGGCTGGAT AGCCGCAGTTGCGATATTTTCCCGCTCTATGCCATTGCCGATGATAGCCCGGGTGCTTGCCATTCTGGGGCTGGTCAGCA TTGGCTTCTATTTGTTTATGCTAACGGTTTCGAACCCCTTTGATCCCAGTTTGCCTCTCATTCCTGTTGACGGTCGCGAT CTCAATCCGCTGCTGCAAGACCCGGGAATGATCATTCATCCGCCATTGCTGTATATGGGCTACGTCGGTTTCTCTGTTGC TTTTGCTTTTGCTATTGCCGCTTTAATGTCAGGCAAGCTTGATGCAGCCTGGGCTCGTTGGTCTCGTCCCTGGACTCTCG CAGCATGGATTTTTCTGACACTGGGTATTGCCATTGGTAGCTGGTGGGCATATTACGAACTTGGCTGGGGTGGCTGGTGG TTCTGGGACCCAGTTGAAAATGCGAGCTTTATGCCATGGCTGGTAGGAACGGCATTACTGCACTCACTTGCCGTAACTGA AAAACGTGGCAGCTTTAAGTCCTGGACGGTATTGCTGGCTATATCCGCTTTCAGTTTGAGCTTATTAGGCACCTTTTTGG TACGTTCCGGCGTTTTAGTGTCAGTGCATGCGTTTGCAACCGACCCCGCCCGAGGCTTGTTTATTCTGATACTGCTGGGG CTGGTTGTCGGCGGTTCGCTTATTCTTTACGGCCTGCGCGCCGGAAAGATGCAAAGTTACAGCCGTTATGAACTGCTTTC ACGAGAAGTGATGCTGCTGGGTAACAATGTCTTGTTAATGGCGGCTATGATAGTTGTGTTTCTGGGCACCATGCTACCTC TGGTTCATAAAGAAATTGGTCTGGGTACCATTTCTATTGGGGCACCTTTCTTTAATGAGCTGTATAGCTGGCTGGTTATT CCATTTGCATTAATGCTGGGTCTTGGACCCTTAATGCGCTGGCGCAGACAAGCTATGCAACCACTTCTGAAACCGCTGGC CTTAGCACTTTCTTTGGCGCTGATTCTGGCCTACACGCTGCCGAAGATTTGGGCCGACGAATTACCCGCGTTGGTGGTTA TTGCGCTGTTTCTGGCGTTCTGGGTGGCTCTGGCTACACTGACCGAAGTCCAGCAAACGGTAAAACAACGCAAGCAGGGT TGGGCCGGGCTGACCAAAATTTCAGGTAGTCATTGGGGAATGGTTCTGGGGCATTTAGGTTTTGCCGTAACGCTTATCGG CATCACCCTGGTTTCAAACTATGAGCAGGAGCGCGATATTGCGCTTGCGCCGGGGCAATCGGTTGATGTTATCGGTTATA ACGTTGTGTTCGAAAGCCTGCAGCATAGGGAAGGACCTAACTACGATGCCGATCAGGGAGTATTTACTGTCTACAAAGAC GGGCAGGAAGTAACGCAGTTAACCAGCGAGAAACGTTTTTACCGGGTACAACGCACCAGTATGACCGAAGTTGGGCTCGA TGCGAGTTTGTTACGCGATATCTATATTGCTATGGGCGAGCCGCTGGATGATGAAACCTGGGCCATTCGTTTCTATATCA AGCCCTTTGTCCGCTGGGTTTGGCTGGGCGCTATTATCATGGCAATAGGCGGCGCTATGGCATTTGCTGATAAACGTTAT CGTAAGCGTGGCAAAAAGGAGATGGCCAATGACTAA Protein sequence : MIAEAGHLAIAIALAFSVLLAVYPLWGAAKGNGGMMALARPFAYGQFFFTAIAFALLVWGFVSNDFSIAYVAANSNSQLP VAYRVTAVWGSHEGSFLLWMLMQAGWIAAVAIFSRSMPLPMIARVLAILGLVSIGFYLFMLTVSNPFDPSLPLIPVDGRD LNPLLQDPGMIIHPPLLYMGYVGFSVAFAFAIAALMSGKLDAAWARWSRPWTLAAWIFLTLGIAIGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALLHSLAVTEKRGSFKSWTVLLAISAFSLSLLGTFLVRSGVLVSVHAFATDPARGLFILILLG LVVGGSLILYGLRAGKMQSYSRYELLSREVMLLGNNVLLMAAMIVVFLGTMLPLVHKEIGLGTISIGAPFFNELYSWLVI PFALMLGLGPLMRWRRQAMQPLLKPLALALSLALILAYTLPKIWADELPALVVIALFLAFWVALATLTEVQQTVKQRKQG WAGLTKISGSHWGMVLGHLGFAVTLIGITLVSNYEQERDIALAPGQSVDVIGYNVVFESLQHREGPNYDADQGVFTVYKD GQEVTQLTSEKRFYRVQRTSMTEVGLDASLLRDIYIAMGEPLDDETWAIRFYIKPFVRWVWLGAIIMAIGGAMAFADKRY RKRGKKEMAND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-148 | 58 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-131 | 53 |
