Gene Information

Name : ILr1888.3 (ILr1888.3)
Accession : -
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2027508 - 2029052 bp
Length : 1545 bp
Strand : -
Note : -

DNA sequence : 
GTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGTAACAGAGAGAAGCTTGCTTC
TCTGCTGACGAGCGGCGGACGGGTGAGTAATACTTGGGAATTTGCCTTTAGGCGGGGGACAACCACGGGAAACTGTGGCT
AATACCGCATAATGTCTACGGACCAAAGTGGGGGACCTTCGGGCCTCACACCTAAAGATGAGCCCAAGCGGGATTAGCTA
GTTGGTGGGGTAAAGGCTCACCAAGGCGACGATCCCTAGCTGTTCTGAGAGGATGATCAGCCACACTGGGACTGAGACAC
GGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGTG
AAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGCGACGAGGAAGGGTGTTGTGTTAATAGCGCAGCACATTGACGTTAGTC
GCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCG
TAAAGCGTACGTAGGCGGCGTGTTAAGCAAGATGTGAAAGCCCCGGGCTCAACCTGGGAATTGCATTTTGAACTGGCATG
CTAGAGTCCTGAAGAGGGTGGTAGAATTTCCAGTGTAGCGGTGAAATGCGTAGATATTGGAAGGAATACCGGTGGCGAAG
GCGGCCACCTGGTCAGAGACTGACGCTGAGGTACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC
CGTAAACGATGTCAACTAGTTGTTCGTGTCATTAAGACGTGAGTAACGCAGCTAACGCACTAAGTTGACCGCCTGGGGAG
TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAC
GCGAAGAACCTTACCATCCCTTGACATCCAGTGAATTTTTCAGAGATGAATTAGTGCCTTCGGGAACACTGAGACAGGTG
CTGCATGGCTGTCGTCAGCTCGTGTTGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTAGTTGCCA
GCACGTAAAGGTGGGAACTCTGGGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCC
CTTACGGGATGGGCTACACACGTGCTACAATGGCGCATACAAAGGGCAGCAAGCCAGCGATGGTTAGCGAATCTCATAAA
GTGCGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCAC
GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGCTGCACCAGAAGTGGTTAGTTTAACC
TTCGGGAGAACGATCACCACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTG
GATCACCTCCTTACAAAACAGCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-140 87.6