Gene Information

Name : secF (IL2147)
Accession : YP_156528.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 2283093 - 2284040 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGAGATAATTAAAACCGATGAACGACTTCCCTTCATGCGCTTCCGCGGAATTATGGGCATTATCAGTGCAGTACT
GGTAGTGGCTTCCATAGTTTCGTTGTCAGTCAATAAGCTCAACTTTGGGTTGGACTTTACTGGCGGAACCTTACTTGAAG
TTGGCTTTGATAGCGCGGCAGATTTAAGTCGTGTTCGTGGTGCATTAGATGAAGAAGGGTTCAGTGACGCAGTAGTTCAA
AACTACGGCTCGCAGGAAGAGATACTGATTCGTCTGGAGCCTCGGGAAGGAGTAAAAGCGGAGCAGCTGGGTACCACAAT
ACTTGAATCTCTGCGCACCGAGTTTGACCAAACCGTTGAAATGCGTCGTATAGAATTTGTTGGCCCAAATGTGGGCGACG
AATTTATAGAGCAGGGCGGGTTGGCTATGCTAACCGCTTTAATCTGTATTCTACTTTACATTGCGATGCGTTTTGAATGG
CGTTTAGCGGTAGGTGCTGTGGCAGCGTTAGCGCACGATGTCATTTTAACCTTAGGGCTGTTCTCCATATTGCAGTTAGA
GTTTGACCTAACGGTTTTAGCGGCCTTGCTGGCAGTTATTGGTTACTCAATTAACGATACGGTGGTGGTTTGCGACCGAA
TTAGGGAAACTTTCCGTAAGTTTGCTAAGTTAACCCCAGTGCAAACTGTTAACCGGGCATTAACCGATACGCTGAGTCGA
ACGTTAATTACTTCAATAACAACGATACTGGTGTTATTGACCTTGTTCTTCCTGGGTGGGCCATTAATTCATGGTTTTGC
TACAGCGTTATTATTTGGTGTGGTTATTGGTACTTATTCATCCATTTATATCGCAAGTTCTGTGGCCCTGAAATTTGGTG
TTAGCCGAGACGACTTAATGCCGCCAGAAGTGGAAAAAGAAGGCGCGGATCAAGATCCGCTGGGTTAG

Protein sequence :
MQEIIKTDERLPFMRFRGIMGIISAVLVVASIVSLSVNKLNFGLDFTGGTLLEVGFDSAADLSRVRGALDEEGFSDAVVQ
NYGSQEEILIRLEPREGVKAEQLGTTILESLRTEFDQTVEMRRIEFVGPNVGDEFIEQGGLAMLTALICILLYIAMRFEW
RLAVGAVAALAHDVILTLGLFSILQLEFDLTVLAALLAVIGYSINDTVVVCDRIRETFRKFAKLTPVQTVNRALTDTLSR
TLITSITTILVLLTLFFLGGPLIHGFATALLFGVVIGTYSSIYIASSVALKFGVSRDDLMPPEVEKEGADQDPLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 6e-54 49
secF AAT96066.1 SecF Not tested T-PAI Protein 4e-54 49