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Name : glcD (ebA4490) Accession : YP_159571.1 Strain : Aromatoleum aromaticum EbN1 Genome accession: NC_006513 Putative virulence/resistance : Unknown Product : glycolate oxidase (FAD-linked subunit) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 2661729 - 2663246 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGAACTTCGACGCCGAAGCACCGGCACCGGCACCGGGTGAGCGGGACGTCGATTTTTCAGCGGTCGACAAGGTGCGGTT GGTCGAAGCGCTGGCGCGCGTGCTGCCAGCCGGGGCGCTGATGTATGACCCCGAGGACCTGCGCCCGTACGAATGCGACG GCCTTTCCGCATACCGGCAGCTGCCGCTGATTGTTGCGCTGCCGACGAGCGAAGAACAGGTCATCGAGGTGCTGCGCGCC TGTCATGAACTGGGCGCGCCGGTGGTCGCGCGCGGCGCGGGGACAGGACTTTCGGGCGGCGCGCTGCCGCATGCGCATGG CGTCGTACTGTCGCTCGCGCGCTTCAACCGGATTCTGCATCTCGACCCACATGCGCGCACCGCCGTCGTCCAGCCGGGCG TGCGCAACCTCGCGATCTCGGAAGCGGCGTCGCCGCACGGGCTTTATTACGCGCCGGACCCGTCGTCGCAGATCGCGTGC ACGATCGGCGGCAACGTCGCCGAGAACTCGGGTGGCGTGCATTGCCTGAAGTACGGCCTGACGGTGCATAACCTGCTCCG GGTGCGTGGCGTGACGATCGAAGGCGACGTCGTCGAGATCGGCAACCACGCGCTCGATGCCCCGGGCTACGATCTGCTCG CGCTGATGAGCGGCTCGGAAGGGATGCTCGCCGTCGTCACCGAAGTCACCGTCAAGCTCACCCCGAAGCCGCAGCTCGCG CAGTGCGTGCTTGCCGCGTTCGACGACGTCGTCCGCGCCGGCGAAGCGGTCGCCGAGATCATCGCCGCCGGCATCATTCC CGCAGGGCTCGAAATGATGGACCAGCCGGCGACCGCCGCGGTCGAGCAGTTCGTCCATGCCGGCTACCCGCTCGACGCGA AAGCGATCCTGCTGTGCGAGTCGGACGGCACACCCGAGGAAGTCGCCGAAGAGATCGCGCGGGTGCGCGCGGTGCTCGAA GCGGGCGGCGCGACCGAGATCCGCGTGTCGCGCGACGAGGCCGAGCGGATGAAATTCTGGGGCGGGCGCAAGGCGGCTTT TCCGGCCGCGGGCCGCATCTCACCCGACTACTACTGCATGGACGGCACGATCCCGAGGAAGCGCCTCGGCGAAATGCTCG AAGCGATCCAGGCGATGGAACGCAAGTACGGGCTGCGCTGCATCAACGTCTTCCACGCCGGCGACGGCAACCTGCATCCG CTGATCCTGTTCGATGCGAACCGGCCGGGCGAACTCGAACAGGCCGAAGCGTTCGGCGCCGAGATCCTCGAGCTGTCGGT CGCGCTCGGCGGCACGATCACCGGCGAGCATGGCGTCGGCATCGAGAAGATCAACCAGATGTGCAGCCAGTTCGCGCGGC CCGAGATCACGATGTTCTTCCGCGTCAAGGCGGCGTTCGATCCGGCCGGGCTGCTCAATCCCGGCAAGGCGATTCCGACG CTGAACCGCTGCGCCGAGTACGGCCGCGAGCGCGTCAGCAAGGGGCACGTACCGTACCCGGATATCCCCCGCTTCTGA Protein sequence : MNFDAEAPAPAPGERDVDFSAVDKVRLVEALARVLPAGALMYDPEDLRPYECDGLSAYRQLPLIVALPTSEEQVIEVLRA CHELGAPVVARGAGTGLSGGALPHAHGVVLSLARFNRILHLDPHARTAVVQPGVRNLAISEAASPHGLYYAPDPSSQIAC TIGGNVAENSGGVHCLKYGLTVHNLLRVRGVTIEGDVVEIGNHALDAPGYDLLALMSGSEGMLAVVTEVTVKLTPKPQLA QCVLAAFDDVVRAGEAVAEIIAAGIIPAGLEMMDQPATAAVEQFVHAGYPLDAKAILLCESDGTPEEVAEEIARVRAVLE AGGATEIRVSRDEAERMKFWGGRKAAFPAAGRISPDYYCMDGTIPRKRLGEMLEAIQAMERKYGLRCINVFHAGDGNLHP LILFDANRPGELEQAEAFGAEILELSVALGGTITGEHGVGIEKINQMCSQFARPEITMFFRVKAAFDPAGLLNPGKAIPT LNRCAEYGRERVSKGHVPYPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-141 | 63 |
