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Name : secD (ebA1417) Accession : YP_157794.2 Strain : Aromatoleum aromaticum EbN1 Genome accession: NC_006513 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 831605 - 833470 bp Length : 1866 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAACCGCTACCCGCTCTGGAAGAACATCCTCATTGGTCTGGTCCTGTTCTTCGGCCTGATCTACACCCTTCCCAACTT CTACGGTGAAGTCCCCGCAGTTCAGGTCTCCAGCGGCAAAGCCACGCTCAAGCTCGACCCCGCGCTGGTCGCCCCGATCG AACAGACGCTGCGCGACGCGGAAGTTCCCTACGACGGCCTGTTCGTCGACGGCAACAGCATCCGCGTGCGGCTCGGGAGC ACCGAAGATCAGCTGCGCGCGAAGGACTCGATCGAGAAGCGGCTCAATCCCGACCCCAGCGATCCTTCCTATATCGTCGC GCTGAACCTGCTGTCGGCTTCGCCGACCTGGCTCACCGCGATCCACGCGCTGCCGATGTACCTCGGCCTCGACCTGCGCG GCGGCGTGCATTTCCTGCTCGAAGTGGACATGCCGGGCGCGATCACGAAGCGTCTCGACGCGACCGCCGGCGACCTGCGC ACGCTGCTGCGCGACAAGGACGTGCGCCACGCCGGCATCGTGCGGGAAGGCAATACCGTTCAGCTGCGCTTTCGCGACGC CGCACAGCGCGAGGCGGCTCGCAACGCGATCCTCAACAGCACGCGCGACCTCCAGCTCGTCGACCGCGACGATGGCTCGA CCGACCTGAAGCTGATCGCGACGCTGACACCGGTCGCCCAGCAGACGATCCGCGACTTCGCGATCAAGCAGAACATCACG ACGCTGCACAACCGCATCAACGAGCTCGGCGTCGCCGAACCGGTGATCCAGCAACAGGGCGCCAACCGTATCGTGGTGCA GCTACCGGGCGTGCAGGACGTCGCGAAGGCGAAAGACATCCTCGGGCGTACCGCGACGCTCGAAGTGCGCATGGTCGACG ACAGCCCGGGCGCACTCGAAGCCGCACTCGCCGGCAACGTGCCGTTCGGCACCGAGCTCTACACCGAGCGCGGCGGCTCG CCGCTGCTGGTGCGCTCGCAGGTCGTGCTGACCGGCGACCGCCTCACCGATGCGCAGCCCGGCTTCGACGGACAGACCAA CGAACCGGCCGTGCACCTGACGCTCGACGCCGCCGGCAGCCGCATCTTCCGCGACGTCACGCGCGAGAACGTCGGCAAGC GCATGGCGATCCTGCTGATCGAAAAAGGCAAGGGCGAAGTCGTCACCGCACCGGTGATCCGCAGCGAGATCGGCGGCGGC CGCGTGCAGATCTCCGGCAGCATGACGACGACCGAAGCGAACGACGTCGCGCTGCTGCTGCGCGCTGGCAGCCTCGCCGC GCCGATGGAGATCATCGAGGAACGCACCGTCGGCCCGAGCTTGGGCGCCGACAACATCGCCAAGGGGTTCAATTCGACGC TGTGGGGTTTCATCGCGATCGCAGTGTTCATGATCGCCTACTACATGCTGTTCGGCCTGATCTCGGCGATCGCGCTGGCA GCGAACCTGCTGCTGCTGGTCGCGCTGCTGTCGCTGCTGCAGGCGACGCTGACCCTGCCCGGCATCGCGGCGATGGCGCT GACGCTGGGCATGGCGATCGACGCGAACGTGCTGATCAACGAACGGATTCGCGAGGAACTGCGCAACGGCGTGTCGCCGC AGGCGGCGATCCACACCGGCTACGATCGCGCGTTCGACACCATCCTCGACTCGAACATCACGACGCTGATCGCCGGCATC GCGCTGCTGGTGTTCGGCTCCGGCCCGGTGCGCGGCTTCGCGGTCGTGCACTGCCTCGGCATCCTGACGTCGATGTTCAG CGCGATCCTGATCTCGCGCATGCTCGTGAACCTGATCTACGGGCGGCGCCGCAAAGTCGAGAGCCTGTCGATCGGCCAGA TCTGGAAACCCGGCAAAGCCGGCTGA Protein sequence : MNRYPLWKNILIGLVLFFGLIYTLPNFYGEVPAVQVSSGKATLKLDPALVAPIEQTLRDAEVPYDGLFVDGNSIRVRLGS TEDQLRAKDSIEKRLNPDPSDPSYIVALNLLSASPTWLTAIHALPMYLGLDLRGGVHFLLEVDMPGAITKRLDATAGDLR TLLRDKDVRHAGIVREGNTVQLRFRDAAQREAARNAILNSTRDLQLVDRDDGSTDLKLIATLTPVAQQTIRDFAIKQNIT TLHNRINELGVAEPVIQQQGANRIVVQLPGVQDVAKAKDILGRTATLEVRMVDDSPGALEAALAGNVPFGTELYTERGGS PLLVRSQVVLTGDRLTDAQPGFDGQTNEPAVHLTLDAAGSRIFRDVTRENVGKRMAILLIEKGKGEVVTAPVIRSEIGGG RVQISGSMTTTEANDVALLLRAGSLAAPMEIIEERTVGPSLGADNIAKGFNSTLWGFIAIAVFMIAYYMLFGLISAIALA ANLLLLVALLSLLQATLTLPGIAAMALTLGMAIDANVLINERIREELRNGVSPQAAIHTGYDRAFDTILDSNITTLIAGI ALLVFGSGPVRGFAVVHCLGILTSMFSAILISRMLVNLIYGRRRKVESLSIGQIWKPGKAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-100 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-101 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-101 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-101 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-101 | 46 |
