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Name : yfhQ (FTT_1279c) Accession : YP_170235.1 Strain : Francisella tularensis SCHU S4 Genome accession: NC_006570 Putative virulence/resistance : Unknown Product : SpoU rRNA methylase family protein Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : 2.1.1.- Position : 1299641 - 1300384 bp Length : 744 bp Strand : - Note : Similar to Q8ZCR9 SpoU-family rRNA methylase from Yersinia pestis (257 aa). FASTA: opt: 688 Z-score: 847.8 E(): 2.5e-39 Smith-Waterman score: 688; 47.755 identity in 245 aa overlap. DNA sequence : ATGAATAATCTATTTAATAATATACATATAGTTCTAGTAGAGCCATCACACAGTGGTAATGTTGGTTCTACTGCTAGAGC AATGCTTAATATGGGGTTGACAAACTTATGGCTTGTAAACCCTAAAAAAGGTATTGATGATGAGGCATTAGCTCTATCAT GTCATGCTACAGAAGTAGTAAATAATGCTACTATTGTAGCTAATCTAGAAGAGGCTCTTGAAGGTGTCGATTATGTGGTT GGAACTAGCGCAAGAGTGCGTAGAGTATCTCTACCTATAGAGCCTATATCTAAAGTTGCTACAAGCATACTTAATAAAAT CCAAAAATCTGATGAAAAAATAGCAATATTATTTGGCAGAGAAAGAACGGGACTCTTAAATGAAGAGCTTTTGATGAGTA ATGTACATGCGTATATCCCGTCAAATGAAGAATATACATCTCTTAATCTAGCTCAGGCTGTACAACTAGTAGCTTATGAG ATTTATAAGCAAGCAATTGAGATTAGCAAGCTTAAACAAGTTCCTGAGTACAATCATTTACATAAAAAAGCTTCCGTAAA AGAGCTGCAAGGTCTATATCAGCATTTTGAGGATAGTATGATCAAGTCGGGATTCTTAGATAAAGATAAACCTGGGCATG TCATGGATAAAGTGCGCAGACTTTTTCAAAGATCCGAACTTGAGAGTCAAGAAGTGAATATTTTGAGAGGTTTTTTAACC TCATTAGAAAATCAGGATAAGTAG Protein sequence : MNNLFNNIHIVLVEPSHSGNVGSTARAMLNMGLTNLWLVNPKKGIDDEALALSCHATEVVNNATIVANLEEALEGVDYVV GTSARVRRVSLPIEPISKVATSILNKIQKSDEKIAILFGRERTGLLNEELLMSNVHAYIPSNEEYTSLNLAQAVQLVAYE IYKQAIEISKLKQVPEYNHLHKKASVKELQGLYQHFEDSMIKSGFLDKDKPGHVMDKVRRLFQRSELESQEVNILRGFLT SLENQDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-40 | 41 |
