Gene Information

Name : LBA1680 (LBA1680)
Accession : YP_194523.1
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1701268 - 1702017 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGAAATTCTTATGGTGGATAACATCACTAAAACTTACGGTAAAAAAGGTGAAAAACAATACCAAGCTTTGAAAGG
CGTTAACTTTAAAGTAGCTTCTGGTGAATTTGTCGCAATTATGGGTGCATCTGGTTCAGGTAAAACTACATTGCTTAACA
TTCTTTCAACGTTAGATAAGCCTACAACCGGTCAAGTCTGTATTAACGGTAAAGATATTAGTAATTTAAATGCTAATCAA
ATGGCAGATTTTCGTAGTAAAGAAATAGGTTTTATTTTCCAAGATTTTAATTTACTAGAAAATTTGACCAATCGTGAAAA
CATTGCTTTACCACTTAGTTTGCGCGGTATTTCGACTAATCGAATTAATCCACTTGTGGATAAGATTGCTGAAAAATTAA
GTATTGCAGAAATACTAAGCAAGTATCCAGCAGAAATTTCAGGTGGTCAAAAACAGCGTGTTGCATCAGCTCGTGCATTG
GTACATGAGCCAGCAATGCTTTTGGCCGATGAACCAACTGGTGCACTTGATTCTAAGAGTGCTAGAGAATTATTAAATAC
AATGGAAAACTTAAATAAGCGAGATGGTGTAACTACTTTGATGGTTACTCACGATCCATTTTCCGCTAGTTTTGCTAATC
GAATTTTATTTATTAAAGACGGTAAAATTGGTGAACAAATGGTTAAAGGGGATAAATCTAGAACGGACTTTTATCATGAA
TTAATTGCTCACTTAGGTACTGAAGAATAG

Protein sequence : 
MNEILMVDNITKTYGKKGEKQYQALKGVNFKVASGEFVAIMGASGSGKTTLLNILSTLDKPTTGQVCINGKDISNLNANQ
MADFRSKEIGFIFQDFNLLENLTNRENIALPLSLRGISTNRINPLVDKIAEKLSIAEILSKYPAEISGGQKQRVASARAL
VHEPAMLLADEPTGALDSKSARELLNTMENLNKRDGVTTLMVTHDPFSASFANRILFIKDGKIGEQMVKGDKSRTDFYHE
LIAHLGTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBA1680 YP_194523.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-40 44
LBA1680 YP_194523.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-47 44
LBA1680 YP_194523.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-36 43
LBA1680 YP_194523.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-37 42