Gene Information

Name : LBA2044 (LBA2044)
Accession : -
Strain : Lactobacillus acidophilus NCFM
Genome accession: NC_006814
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 434247 - 435818 bp
Length : 1572 bp
Strand : +
Note : -

DNA sequence : 
AAAACGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGAGCTGAACCAACA
GATTCACTTCGGTGATGACGTTGGGAACGCGAGCGGCGGATGGGTGAGTAACACGTGGGGAACCTGCCCCATAGTCTGGG
ATACCACTTGGAAACAGGTGCTAATACCGGATAAGAAAGCAGATCGCATGATCAGCTTATAAAAGGCGGCGTAAGCTGTC
GCTATGGGATGGCCCCGCGGTGCATTAGCTAGTTGGTAGGGTAACGGCCTACCAAGGCAATGATGCATAGCCGAGTTGAG
AGACTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGAC
GAAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTTGGTGAAGAAGGATAGA
GGTAGTAACTGGCCTTTATTTGACGGTAATCAACCAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA
GGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGAAGAATAAGTCTGATGTGAAAGCCCTCGGCT
TAACCGAGGAACTGCATCGGAAACTGTTTTTCTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGGAATGC
GTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGACTGCAACTGACGCTGAGGCTAGAAAGCATGGGTAGC
GAACAGGATTAGATACCTTGGTAGTCCATGCCGAAAACGATGAGTGCTAAGTGTTGGGAGGTTTCCGCCTTTCAGAGCTG
CAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCATGGTTGATACTCAAAGGAATTGACGGGGGCCCGCACAA
GCGGGGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCTAGTGCAATCCGTAGAGATA
CGGAGTTCCCTTCGGGGACACTAAGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCC
GCAACGAGCGCAACCTTTGTCATTAGTTGCCAGCATTAAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGA
AGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACATTGGACAGTACAACGAGGAGC
AAGCCTGCGAAGGCAAGCGAATCTCTTAAAGCTGATCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGCTGGA
ATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAG
TCTGCAATGCCCAAAGCCGGTGGCCTAACCTTCGGGATGGAGCCGTCTAAGGCAGGGCAGATGACTGGGGTGAAGTCGTA
ACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAAG

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-230 81.2
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-230 81.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-231 81.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-231 81.2