Gene Information

Name : VF_1003 (VF_1003)
Accession : YP_204386.1
Strain :
Genome accession: NC_006840
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1107697 - 1109172 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGATACAAGCACAGCACAAGAGCTAGATAATCAAGTTACTGTTGGACTTCTTGATCAAATCGTAGCTCAAACCAA
TTTAACTCCAGAAGATGAAACATACGGTATTGCTAAGCGTGGTGTCAGCGCTTTTATTGAAGAGTTATTAAAACCTCAGA
ATCAAGAAGAGCCAGTCAAAAAAGCTTTAATTGATAAAATGATCACAGAGATTGATCAACGCTTAAGTAAACAAGTGGAC
GAAATTCTTCACCACTCGTCTTTTCAACAACTTGAATCTGCTTGGCGTGGATTAAAATTACTCGTTGACCGCACCGATTT
TCGTGAAAATATTAAAATCGAAGTGATTAATGTATCTAAAACTGACTTGTTAGAGGACTTCGAAGATGCTTCAGAAATTA
CTCAATCAGGACTCTACAAGCATGTCTACACTAACGAGTTTGGTACATTTGGTGGCCAACCTGTTGGTGCTATTATTGGT
AATTATGACTTTGGTCCTTCTGCGCCTGATATTAAAAACCTTCAAAACTTGGCTTCTGTAGCAGCAATGTCTCATGCACC
ATTTATTTCAGCCGCAGGCCCTAAATTCTTTGGCTTAGAATCATTTGAGGGATTACCTGATCTAAAAGATCTTAATGATC
ATTTTGAAAGTCCTCAATATGCAAAATGGCAAAGCTTCCGTGAACAAGAAGACTCAAGATATGTAGGTTTAACATTACCT
AGATTCTTATTACGTCAACCTTATGATCCAGAAGAAAACCCTGTAAAAGCATTCAATTACCATGAAAATGTTTCTGCTAC
TCACGAAGATTATTTATGGGGAAATACCGCTTTTACAATGGCAACTCGTATCACTGAAAGTTTTGCTAATTTCCGTTGGT
GTCCAAATATTATTGGTCCTCAATCAGGTGGTGCAGTGGAAGACCTACCTCTCCACCACTTTGAAAGTATGGGTGATATT
GAAACTAAGATCCCAACAGAAGTTCTTGTTTCCGACCGCAGAGAATATGAATTAGCAGAAGAAGGCTTTATTGCTCTCAC
CATGCGCAAAGGCTCAGATAATGCGGCTTTCTTCTCTGCTAACTCTGTTCAAAAAGCAAAGTTTTTCGGTAATACAGAAG
AAGGCAAAAACGCTGAGTTAAATTTCCGTTTGGGTACGCAGCTCCCTTACTTGTTCATTATTAGCCGCCTTGCACATTAC
ATTAAGGTGCTACAACGTGAACAAATCGGTAGTTGGAAAGAACGTACAGACTTAGAGCAAGAGTTAAACACTTGGATTCG
TCAATACATTGCTGATCAAGAAAATCCACCAGCTGAAGTTCGTAGCCGTCGTCCACTTCGTGCAGCAAATATCGAAGTAA
TGGACGTTGAAGGAAATCCAGGCTGGTACAAAGTAAACCTATCAGTTCGCCCACACTTCAAATACATGGGTTCTGATTTT
ACGTTGTCGCTAGTTGGTAAATTGGATCAAGAGTAA

Protein sequence :
MSDTSTAQELDNQVTVGLLDQIVAQTNLTPEDETYGIAKRGVSAFIEELLKPQNQEEPVKKALIDKMITEIDQRLSKQVD
EILHHSSFQQLESAWRGLKLLVDRTDFRENIKIEVINVSKTDLLEDFEDASEITQSGLYKHVYTNEFGTFGGQPVGAIIG
NYDFGPSAPDIKNLQNLASVAAMSHAPFISAAGPKFFGLESFEGLPDLKDLNDHFESPQYAKWQSFREQEDSRYVGLTLP
RFLLRQPYDPEENPVKAFNYHENVSATHEDYLWGNTAFTMATRITESFANFRWCPNIIGPQSGGAVEDLPLHHFESMGDI
ETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKAKFFGNTEEGKNAELNFRLGTQLPYLFIISRLAHY
IKVLQREQIGSWKERTDLEQELNTWIRQYIADQENPPAEVRSRRPLRAANIEVMDVEGNPGWYKVNLSVRPHFKYMGSDF
TLSLVGKLDQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-166 63
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 9e-167 63
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 7e-155 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_1003 YP_204386.1 hypothetical protein VFG2093 Protein 0.0 71
VF_1003 YP_204386.1 hypothetical protein VFG2475 Protein 4e-172 63