Gene Information

Name : VF_1004 (VF_1004)
Accession : YP_204387.1
Strain :
Genome accession: NC_006840
Putative virulence/resistance : Virulence
Product : cytoplasmic protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1109176 - 1109676 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence :
ATGTCAAAAGATGGATCTGTTGCACCAAAAGAACGTGTAAATGTGACATTCAAACCAGTAAGCGGTGACGCTGCAGAAGA
TCTTGAACTTCCACTGAAAATGATGGTTCTTGGTGACTTTACTCAGCAAGAAGATGATCGAAAACTTGAAGATCGAAAAC
CATTTAATGTTGATAAAAGCAATTTCAATGACGTTATTGAAAAACAAAACTTAAACATCTCTTTTGGTGTAAAAAACCAA
CTTCAAGATGATGGCGAAGGAAATGAGGAAATTGCAGTCGATCTAAGTTTTAAACATATCAATGATTTTGATCCTTCAAG
CATTGTTGAGCAAGTGCCTGAACTAAAAGGCTTAATGGATTTACGTGAAGCGCTTGTCTCTTTAAAAGGCCCATTAGGCA
ATGTTCCTGCATTCCGCAAAGCAATTGAAGATGCCCTTGTTGATGATGAAGCTCGTGAAAAACTACTAAGTGAATTAGGT
TTAGTGACAGAAAAGGAATAA

Protein sequence :
MSKDGSVAPKERVNVTFKPVSGDAAEDLELPLKMMVLGDFTQQEDDRKLEDRKPFNVDKSNFNDVIEKQNLNISFGVKNQ
LQDDGEGNEEIAVDLSFKHINDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVDDEAREKLLSELG
LVTEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-32 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-31 41
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_1004 YP_204387.1 cytoplasmic protein VFG2092 Protein 7e-42 52
VF_1004 YP_204387.1 cytoplasmic protein VFG2474 Protein 7e-41 50